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AT3G10195.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Predictors External Curations
AdaBoost: plasma membraneBaCelLo: endoplasmic reticulumBaCelLo: extracellularBaCelLo: golgi
iPSORT: endoplasmic reticulumiPSORT: extracellulariPSORT: golgiMultiLoc: endoplasmic reticulum
Plant-mPloc: extracellularPlant-mPloc: nucleusPlant-mPloc: plasma membranePlant-mPloc: plastid
Predotar: endoplasmic reticulumPredotar: extracellularPredotar: golgiPredSL: endoplasmic reticulum
PredSL: extracellularPredSL: golgiPProwler: endoplasmic reticulumPProwler: extracellular
PProwler: golgiSLPFA: endoplasmic reticulumSLPFA: extracellularSLPFA: golgi
SLP-Local: endoplasmic reticulumSLP-Local: extracellularSLP-Local: golgiSubLoc: extracellular
TargetP: endoplasmic reticulumTargetP: extracellularTargetP: golgiWoLF PSORT: extracellular
YLoc: extracellular
 SwissProt : extracellular 16381842
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Putative membrane lipoprotein
Curator
Summary (TAIR10)		 Encodes a defensin-like (DEFL) family protein.
Computational
Description (TAIR10)		 Putative membrane lipoprotein; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSWMeggNOG:ENOG41108ETEMBL:AC009400EMBL:CP002686
EnsemblPlants:AT3G10195EnsemblPlants:AT3G10195.1entrez:3768836GeneID:3768836
GO:GO:0005576GO:GO:0031640GO:GO:0050832Gramene:AT3G10195.1
HOGENOM:HOG000130021KEGG:ath:AT3G10195OMA:IGIPRCKPaxDb:Q2V3X3
Pfam:Q2V3X3Pfscan:PS51257PRO:PR:Q2V3X3Proteomes:UP000006548
RefSeq:NP_001030667.1TAIR:AT3G10195TMHMM:TMhelixUniGene:At.63244
UniProt:Q2V3X3
Coordinates (TAIR10) chr3:-:3156630..3156976
Molecular Weight (calculated) 8871.11 Da
IEP (calculated) 8.67
GRAVY (calculated) 0.27
Length 81 amino acids
Sequence (TAIR10)
(BLAST) 		1: MEKISAFFVI LFLVSSCLVT MSVGDICQTD RDCVEIGIPR CKRTGKMPIC YNGYCCCICS AKRLPASTTR KPPSPSTSKL V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)