AT3G06640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PAS domain-containing protein tyrosine kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT3G06620.1); Has 125232 Blast hits to 123605 proteins in 4849 species: Archae - 220; Bacteria - 14873; Metazoa - 46551; Fungi - 11020; Plants - 33122; Viruses - 498; Other Eukaryotes - 18948 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2074491..2078317 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82139.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 730 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVKLLQDPIT PNKELLKKMI ELEKSQEHLM QEMSRLKVST ELRKESRIQC SMNLRPSPWK FTHKQYLNIL QSMAQSVHAF DLNMRIIFWN AMAEKVYGYS 101: AAEAVGQNPI DVMVDDRDAP FAMTIAQLCS NGESWTGKFP VKRRTGEKFS AVTTCSPFYA DDGSLIGIVS ITSDVAPYLN PTISLAKLKA SEVETSSTPA 201: RNSFAFKLGL DTKGAVVSKL GLDSDQPIQV AIASKISDLA SKVRNKVRSK MPAGDSSVTV FEGETGDSHH SDHGVFGATL SDHMDDAASS GASTPRGDFI 301: QSPFGVFTCN DDKFSSEPFI DSSDGYPITL FTSKAEEWMV KKGLSWPWKG NEQEGSRVKP TYSVWPCVQN EQKKDKSHQI NRYSGVKSKS HASESNKPTN 401: NKASGLRSSC INANSAISRG IISHSTMNKV DTNSNCLEYE ILWDDLTIGE QIGQGSCGTV YHGLWFGSDV AVKLISKQEY SEEVIQSFRQ EVSLMQRLRH 501: PNVLLFMGAV TLPQGLCIVS EFLPRGSLFR LLQRNMSKLD WRRRINMALD IARGMNYLHR CSPPIIHRDL KSSNLLVDKN LTVKVADFGL SRIKHHTYLT 601: SKSGKGMPQW MAPEVLRNES ADEKSDIYSF GVVLWELATE KIPWENLNSM QVIGAVGFMN QRLEIPKDID PDWISLIESC WHRDAKLRPT FQELMERLRD 701: LQRKYTIQFQ ATRWLTMVRT ESSQVLKQNH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)