AT3G04910.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.970 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : with no lysine (K) kinase 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1356061..1358057 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65188.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.58 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||||||
| Length | 574 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKHWCRQILR GLHYLHSHDP PVIHRDLKCD NIFVNGNQGE VKIGDLGLAA ILRKSHAAHC VGTPEFMAPE VYEEAYNELV DIYSFGMCIL EMVTFDYPYS 101: ECTHPAQIYK KVMSGKKPDA LYKVKDPEVK CFIEKCLATV SLRVSARELL DDPFLRIDDG EFDLRSVDME DSVGPLYRQP HHLPDYYNYP SNSSSLNRQY 201: SNGNYPSNSS SLNRQYSNGY NSHHEYQNGW AYNPAETEET HGIELFESRN NDDQEEEKKS GNVDITIKGK RRDDGGLFLR LRIADKEGRV RNIYFPFDIE 301: TDTALSVATE MVAELDMDDH GVTKIANMID GEISSLVPSW RPGPEFEECL AAAAAANAAS ICNNCVSNRT SMGSVMDFLR TNPGANVIQC CRNGCGETHG 401: RFEEITIRET EVRLRELWKL QQQQESRELS SIDSGHNHSE EEEEEEVLYE DPENMFSCEA GNEINHISGS GSFSFMPSKY CDEPSEKTEN QVQQELRWLK 501: AKCQIELRDI QDEQLKTRWP ESGEEVEISP KDGFLGSVSG LGREEDTVKE MFGERLVPKC LKRTTSLPVD AIDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)