AT3G04910.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : with no lysine (K) kinase 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1355151..1358057 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77793.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.81 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||||||||||||||||||
| Length | 677 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDTMKFLVK ELQRLYRAFD EYEGIEVAWN QVKLYDFLQS PEDLERLYCE IHLLKTLKHK NIMKFYTSWV DTANRNINFV TELFTSGTLR QYRLRHKRVN 101: IRAMKHWCRQ ILRGLHYLHS HDPPVIHRDL KCDNIFVNGN QGEVKIGDLG LAAILRKSHA AHCVGTPEFM APEVYEEAYN ELVDIYSFGM CILEMVTFDY 201: PYSECTHPAQ IYKKVMSGKK PDALYKVKDP EVKCFIEKCL ATVSLRVSAR ELLDDPFLRI DDGEFDLRSV DMEDSVGPLY RQPHHLPDYY NYPSNSSSLN 301: RQYSNGNYPS NSSSLNRQYS NGYNSHHEYQ NGWAYNPAET EETHGIELFE SRNNDDQEEE KKSGNVDITI KGKRRDDGGL FLRLRIADKE GRVRNIYFPF 401: DIETDTALSV ATEMVAELDM DDHGVTKIAN MIDGEISSLV PSWRPGPEFE ECLAAAAAAN AASICNNCVS NRTSMGSVMD FLRTNPGANV IQCCRNGCGE 501: THGRFEEITI RETEVRLREL WKLQQQQESR ELSSIDSGHN HSEEEEEEEV LYEDPENMFS CEAGNEINHI SGSGSFSFMP SKYCDEPSEK TENQVQQELR 601: WLKAKCQIEL RDIQDEQLKT RWPESGEEVE ISPKDGFLGS VSGLGREEDT VKEMFGERLV PKCLKRTTSL PVDAIDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)