AT3G02645.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.510 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF247) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:566271..567860 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61402.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.54 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||
| Length | 529 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLPKKPIFSS TEQHRFDETR WVINVQKSLD AELEEHDLEE VTVSIFNVPK ALMCSHPDSY TPHRVSIGPY HCLKPELHEM ERYKLMIARK IRNQYNSFRF 101: HDLVEKLQSM EIKIRACYHK YIGFNGETLL WIMAVDSSFL IEFLKIYSFR KVETLINRVG HNEILRDIMM IENQIPLFVL RKTLEFQLES TESADDLLLS 201: VLTGLCKDLS PLVIKFDDDQ ILKAQFQECN HILDFLYQMI VPRIEEEELE EDDEENRADE NGGNRAIRFM DEIKHQFKRV FASRPADLIL RFPWRIISNL 301: PGFMALKLSA DYLFTRQENE ATTTRQESVS ILDIEKPPLV EELTIPSVSD LHKAGVRFKP TAHGNISTVT FDSNSGQFYL PVINLDINTE TVLRNLVAYE 401: ATNTSGPLVF TRYTELINGI IDSEEDVRLL REQGVLVSRL KSDQEAAEMW NGMSKSVRLT KVGFLDKTIE DVNRYYTGRW KVKIGRLVEV YVYGSWQILA 501: FLAAVLLLML VSLQLFSLVF SSFLRFRAG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)