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AT2G35200.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.868
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32690.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:818087eggNOG:ENOG410IZXFeggNOG:ENOG410YUVBEMBL:AC004667EMBL:AY954815EMBL:CP002685EnsemblPlants:AT2G35200
EnsemblPlants:AT2G35200.1entrez:818087GeneID:818087Gramene:AT2G35200.1hmmpanther:PTHR34197hmmpanther:PTHR34197:SF2HOGENOM:HOG000092983
KEGG:ath:AT2G35200OMA:HEGRFVCPhylomeDB:O82172PIR:G84765Proteomes:UP000006548RefSeq:NP_181064.1TAIR:AT2G35200
UniGene:At.37697UniProt:O82172
Coordinates (TAIR10) chr2:+:14833888..14834493
Molecular Weight (calculated) 22603.10 Da
IEP (calculated) 10.10
GRAVY (calculated) -0.53
Length 201 amino acids
Sequence (TAIR10)
(BLAST)
001: MQREKTQTNL RLDEGGGSVW QKCSRHEGRF VCVAGVCPYC LHERLSSLCP DCAHDLPCSC TPRASVSSRG EGDVSFARIG SVGRVANLIE CEPAFRRSTS
101: ITGPYFWSAK PEPILETEKD LKPGRGRWLW RLFRGNREEE TKIKAAKVMK KSNSVAGEVL FSPTPVTSKG NGWYFPSPIK VFRQSRVSKM IFQQRSPLYR
201: G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)