AT2G34350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.938 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nodulin-like / Major Facilitator Superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nodulin-like / Major Facilitator Superfamily protein; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G34355.1); Has 2493 Blast hits to 2443 proteins in 749 species: Archae - 31; Bacteria - 1261; Metazoa - 7; Fungi - 296; Plants - 599; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14493624..14495644 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57569.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.64 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.65 | ||||||||||||||||||||||||||||||||
| Length | 525 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEFANTKWVA AAASIWIQSF SGASYTFGIY SSVLKSSQSY DQSTLDTVSV YKDIGANVGI LSGLFYTAVA SRKSGNGGFF SGPWLVIFVG LLQWFVGYGF 101: IWMATSGVIP RPPVAMMCLF MFFAGHCQPF FNTAIVVTAV RNFSDYGGTA VGIMKGYLGL SGAILVQMYH IFCGGDPRNY ILLLAVVPSL LILTLMPFVR 201: TYDTVIAGDK KHLNGLSAIS LIIVTYLMVV ILVENIIGMS MPMKICSFTF LLLLLASPLL VAVRAQREEE HRFLSLDFPV TERTTLLDSP KLNSSSDVKD 301: VMTNDMNVLE AICTTNFWLL FVAMICGMGS GLATINNIRQ MGESLRYSTV QLNSLVSLWS IWNFLGRFGS GYISDTYLHS HGWPRPVFMA ITLGLMAIGH 401: IVMASGLLGS LYIGSLLVGL AYGSQWSLMP TITSEIFGVL HMGTIFYTIS IASPVGSYFF SVKVIGYLYD KVASEDDHSC YGNHCFRTSF LIMAAMALLG 501: SLVALVLLLR TKKFYATLVA KRILK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)