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AT2G22340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 56 Blast hits to 38 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC006592EMBL:CP002685EMBL:DQ446548EnsemblPlants:AT2G22340EnsemblPlants:AT2G22340.1entrez:816766GeneID:816766
GO:GO:0016021Gramene:AT2G22340.1HOGENOM:HOG000153498KEGG:ath:AT2G22340OMA:ESSHIRCPhylomeDB:Q9SJZ9PIR:E84611
Proteomes:UP000006548RefSeq:NP_179821.1STRING:3702.AT2G22340.1TAIR:AT2G22340TMHMM:TMhelixUniGene:At.66232UniProt:Q9SJZ9
Coordinates (TAIR10) chr2:-:9492879..9493955
Molecular Weight (calculated) 41920.40 Da
IEP (calculated) 7.58
GRAVY (calculated) 0.27
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MANLDCQTYV TCLYATVGFQ ELTLSIPNQT LVTLLGPFVV WFISHFFWIS VINMIESSHI RCRSHLIMLI RWNQVVFLHR KFVSGVLVHC RWNFRLLTGE
101: CTLTQWYGVS TWVFDPGING GINLLDGIRI LDRIEFLMTL TLSKDGDVYS LPWLEYLLSS IDSMGCGVYG SKMKVAIFFE DDDVHYFSWT EASLLPEGDC
201: FIQLNCLWYK PKEDTSVMGR KMASSDCDSD VLSFSLLENL TAMKGEIKIT NRQRCVRCFQ HIILSFKRQE AESYQATIQV FLLTKVMRKA FWSFIYMVIA
301: NYEYVKEGRN RFYLLACKAS DRQAWSIPLL YRNCYQFLLF VSMVVYEWFI YLVKLFMI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)