AT2G13150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.938 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G12940.1); Has 1035 Blast hits to 1035 proteins in 116 species: Archae - 3; Bacteria - 11; Metazoa - 293; Fungi - 24; Plants - 643; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:5437056..5438459 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29697.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.00 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||||||||||
| Length | 262 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNGSDNSTPS RPRSITQPSL AFSSLPPLSP SPSSSRRNSI PLMNPSASVE SRDSSIRVKK KSLLPPLCVK RRAPKDDIEP FKRHYRSLSV DSCLSDLLKL 101: PPSPNNVSSS RSVDGEQNAS ELEFDTSVYT DDELNKIAKS TKLKEVASDP KEVRRILKNQ ESAARSKQKK LQYMINLELK INFLENKNAS IFEKIKLLEN 201: DKTMRMNEKK EIMIRIESLE QHAELRDALT EHLHVEIERL KAVLISNEKG NEKSPKSRDD NM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)