AT1G80590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WRKY DNA-binding protein 66 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of WRKY Transcription Factor; Group III | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
WRKY DNA-binding protein 66 (WRKY66); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: ABA overly sensitive mutant 3 (TAIR:AT1G66600.1); Has 3124 Blast hits to 2704 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3114; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:30296210..30297156 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26404.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.15 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||||||||||
| Length | 235 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLEIDAKAV SALLLGQGCA NNLKTLLKNH ETGSVSTEPL INSILDSFSF ALSSQNIPRH VSQRSSKKKM CGIQGMEDSP TPAHIDGFIW RKYGQKTIKT 101: SPHQRWYYRC AYAKDQNCDA TKRVQKIQDN PPVYRNTYVG QHACEAPAYA VNNGGTYGSK MIKFDYVIPE SVMPQPLSID SQEITMEDKD TDDHILNYIN 201: EHLMEDEAYD VFPDVLGERC CFGLEPFPGL NINKS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)