AT1G76290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.914 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AMP-dependent synthetase and ligase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 63645 Blast hits to 61448 proteins in 3348 species: Archae - 1176; Bacteria - 38905; Metazoa - 2898; Fungi - 2339; Plants - 2105; Viruses - 1; Other Eukaryotes - 16221 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28623443..28625408 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60497.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.33 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 546 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGTMRCSAN YVPLSPISFL ERAAVVFGSR TSVVYGDIQY TWHQTRDRCV RLASALSDLG LSRHDVVAAL APNVPALCEL YFGAPMAGAV LCVLNTTFDS 101: QMLAMALEKT KPKVFFVDSE FLSVAEESLS LLSNIEEKPL IITITENPTE QSKYEQYEDF LSTGNPNFKP IRPVDECDPI ALNFTSGTTS TPKCVVYSHR 201: GAYLNATAVG VMNEMKPMPV YLCTVPMYHC SGWCYIWTVT AFGGVIVCLR EVNDEVIFDS IVKHKVTNFG GSPPVLNMIA NARDSVKKSF PWTVQVMSGG 301: SSPPEVMLKL KKLGFKVMMA YGCSEVYGLG TACLWMPEWE TLPEEESLRL KARDGLNHFA KEAVDVLDPT TMKSVPHDGK TIRVIALRGN TVMSGYFKDK 401: EATEAAFRGG WYWSRDMGVI DPDGYIQFKD RSQDVITCGG EIVGSKEIEG ILYSHPAVYD AGVVGRPDET LGESMCAFVK LKEGAEAREE EIIEFCKRKL 501: GNKNMKMIPK TVVFSDVPKT PTGKIRKNVL RKMAKDMGYV QLRAVE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)