AT1G62160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Serine protease inhibitor (SERPIN) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT1G62170.2); Has 3694 Blast hits to 3656 proteins in 333 species: Archae - 60; Bacteria - 246; Metazoa - 2628; Fungi - 4; Plants - 325; Viruses - 305; Other Eukaryotes - 126 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22972352..22973303 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 24889.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.47 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||||||
| Length | 220 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVAASSGDEQ DDELRFFILS FLKASSTDEL NAVLRKIASS VFVDGSKKGG PKMRGHKNFE KQYIAAYDGF KVLRLPYRQG RDNTNRNFSM YFYLPDKKGE 101: LDDLLKRMTS TPGFLDSHTP RERVEVDEFR IPKFKIEFGF EASSVFSDFE IDVSFYQKAL IEIDEEGTEA AAATAFVDNE DGCGFVETLD FVADHPFLFL 201: IREEQTGTVL FAGQIFDPSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)