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AT1G58190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.542
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor like protein 9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 9 (RLP9); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 56 (TAIR:AT5G49290.1); Has 228906 Blast hits to 34132 proteins in 1230 species: Archae - 113; Bacteria - 14890; Metazoa - 57611; Fungi - 2795; Plants - 136156; Viruses - 105; Other Eukaryotes - 17236 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G58190EnsemblPlants:AT1G58190.1entrez:842186ExpressionAtlas:F4I9S3Gene3D:3.80.10.10GeneID:842186
GO:GO:0016021Gramene:AT1G58190.1hmmpanther:PTHR27004hmmpanther:PTHR27004:SF29InterPro:IPR001611InterPro:IPR003591InterPro:IPR013210
InterPro:IPR032675OMA:SWFLENYPfam:PF00560Pfam:PF08263Pfam:PF13855Pfscan:PS51450PRIDE:F4I9S3
PROSITE:PS51450ProteinModelPortal:F4I9S3Proteomes:UP000006548RefSeq:NP_176115.2SMART:SM00369SMR:F4I9S3SUPFAM:SSF52047
SUPFAM:SSF52058TAIR:AT1G58190tair10-symbols:AtRLP9tair10-symbols:RLP9TMHMM:TMhelixUniGene:At.43546UniProt:F4I9S3
Coordinates (TAIR10) chr1:+:21540720..21544330
Molecular Weight (calculated) 105695.00 Da
IEP (calculated) 5.42
GRAVY (calculated) -0.00
Length 932 amino acids
Sequence (TAIR10)
(BLAST)
001: MLIFTIPQFF FAAWVMVVSL QMQGYISCIE KERKGLLELK AYVNKEYSYD WSNDTKSDCC RWERVECDRT SGRVIGLFLN QTFSDPILIN LSLFHPFEEL
101: RTLNLYDFGC TGWFDDIHGY KSLGKLKKLE ILDMGNNEVN NSVLPFLNAA SSLRTLILHG NNMEGTFPMK ELKDLSNLEL LDLSGNLLNG PVPGLAVLHK
201: LHALDLSDNT FSGSLGREGL CQLKNLQELD LSQNEFTGPF PQCFSSLTQL QVLDMSSNQF NGTLPSVISN LDSLEYLSLS DNKFEGFFSF DLIANLSKLK
301: VFKLSSKSSL LHIESEISLQ LKFRLSVIDL KYCNLEAVPS FLQQQKDLRL INLSNNKLTG ISPSWFLENY PKLRVLLLWN NSFTIFHLPR LLVHSLHVLD
401: LSVNKFDEWL PNNIGHVLPN ISHLNLSNNG FQGNLPSSFS EMKKIFFLDL SHNNLSGSLP KKFCIGCSSL SILKLSYNRF SGKIFPQPMK LESLRVLIAD
501: NNQFTEITDV LIHSKGLVFL ELSNNSLQGV IPSWFGGFYF LYLSVSDNLL NGTIPSTLFN VSFQLLDLSR NKFSGNLPSH FSFRHMGLLY LHDNEFSGPV
601: PSTLLENVML LDLRNNKLSG TIPRFVSNRY FLYLLLRGNA LTGHIPTSLC ELKSIRVLDL ANNRLNGSIP PCLNNVSFGR SLDYEIDPDF GSSYGMVRAD
701: QELEESYSRS LVLPLEFELD YSGYLDFTVE FASKRRYDSY MGESFKFMFG LDFSSNELIG EIPRELGDFQ RIRALNLSHN SLSGLVPESF SNLTDIESID
801: LSFNVLHGPI PHDLTKLDYI VVFNVSYNNL SGLIPSQGKF LSLDVTNYIG NPFLCGTTIN KSCDDNTSGF KEIDSHSGDD ETAIDMETFY WSLFATYGIT
901: WMAFIVFLCF DSPWRQAWFR LVNVFVSFLK CV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)