AT1G51870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 115212 Blast hits to 113697 proteins in 4246 species: Archae - 99; Bacteria - 13180; Metazoa - 42811; Fungi - 9496; Plants - 32903; Viruses - 338; Other Eukaryotes - 16385 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19262879..19267001 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93170.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 837 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSLHFCLLF MIVSFTVSRP VEAQDQAGFI SLDCGLVPKE TTYVETSTNI TYKSDANYTD SGLVGKINDA HKTLVQQPLW ALRSFPEGER NCYNFNLTVN 101: STYLIRGTFL YGNYDGLNQS PSFDLHIGAS KWTSVNIVGV TDTVMPEIIH VLTQKRLQVC LVKTGKTTPF ISSLELRPLI NNIYIAESGS MVLQNRVYFP 201: SDSTSIVRYD EDIHDRVWNP VSDDDSSSIS TDLQVQTNNL YDVPQFVMKT AAIPKDASAP WSLVWTIDNT TALSYVYMHF AEIQDLKAND LREFDITYNG 301: GKLWFSQFRP NKLSILTMFS QVPLTSSNGE YNFTFEMTSN STLPPLINAL EIYTGLEILQ LQTDKDEVSA MMNIKTTYDL SKKISWQGDP CAPQLYRWEG 401: LDCSYPDTEA SRIISLNLNA SGLNGTITSD ITKLTQLSEL LGEKVKMNPT AKKESKKVPI VPIAASVAGV FALIVILAIF FIVKGKKGKS AEGPPLSVTS 501: GTAKSETRSS NPSIMRKDRK ITYPQVLKMT NNFERVLGKG GFGTVYHGNM EDAQVAVKML SHSSAQGYKE FKAEVELLLR VHHRHLVGLV GYCDDGDNLA 601: LIYEYMANGD LRENMLGKRG GNVLTWENRM QIAVEAAQGL EYLHNGCTPP MVHRDVKTTN ILLNAQCGAK LADFGLSRSF PIDGECHVST VVAGTPGYLD 701: PEYYRTNWLS EKSDVYSFGV VLLEIVTNQP VINQTRERPH INEWVGFMLS KGDIKSIVDP KLMGDYDTNG AWKIVELGLA CVNPSSNLRP TMAHVVIELN 801: ECVAFENARR QGSEEMYTRS STNFSHTSAS EFSPGAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)