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AT1G10400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.994
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G14860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G10400-MONOMERCAZy:GT1EC:2.4.1.-eggNOG:COG1819eggNOG:KOG1192EMBL:AC005489EMBL:AK117278
EMBL:CP002684EnsemblPlants:AT1G10400EnsemblPlants:AT1G10400.1entrez:837580ExpressionAtlas:Q9SY84GeneID:837580Genevisible:Q9SY84
GO:GO:0016758Gramene:AT1G10400.1gramene_pathway:2.4.1.-gramene_pathway:2.4.1.203gramene_pathway:2.4.1.215gramene_pathway:PWY-2902hmmpanther:PTHR11926
hmmpanther:PTHR11926:SF250HOGENOM:HOG000237565InParanoid:Q9SY84InterPro:IPR002213InterPro:IPR002999KEGG:ath:AT1G10400ncoils:Coil
OMA:PGVECTDPANTHER:PTHR11926PaxDb:Q9SY84Pfam:PF00201Pfam:Q9SY84Pfscan:PS50304PhylomeDB:Q9SY84
PRIDE:Q9SY84PRO:PR:Q9SY84PROSITE:PS00375ProteinModelPortal:Q9SY84Proteomes:UP000006548RefSeq:NP_172511.3scanprosite:PS00375
SMR:Q9SY84STRING:3702.AT1G10400.1SUPFAM:SSF53756TAIR:AT1G10400UniGene:At.42182UniProt:Q9SY84UniProt:W8Q3T6
Coordinates (TAIR10) chr1:-:3414869..3416358
Molecular Weight (calculated) 52957.00 Da
IEP (calculated) 4.98
GRAVY (calculated) -0.16
Length 467 amino acids
Sequence (TAIR10)
(BLAST)
001: MELEKVHVVL FPYLSKGHMI PMLQLARLLL SHSFAGDISV TVFTTPLNRP FIVDSLSGTK ATIVDVPFPD NVPEIPPGVE CTDKLPALSS SLFVPFTRAT
101: KSMQADFERE LMSLPRVSFM VSDGFLWWTQ ESARKLGFPR LVFFGMNCAS TVICDSVFQN QLLSNVKSET EPVSVPEFPW IKVRKCDFVK DMFDPKTTTD
201: PGFKLILDQV TSMNQSQGII FNTFDDLEPV FIDFYKRKRK LKLWAVGPLC YVNNFLDDEV EEKVKPSWMK WLDEKRDKGC NVLYVAFGSQ AEISREQLEE
301: IALGLEESKV NFLWVVKGNE IGKGFEERVG ERGMMVRDEW VDQRKILEHE SVRGFLSHCG WNSLTESICS EVPILAFPLA AEQPLNAILV VEELRVAERV
401: VAASEGVVRR EEIAEKVKEL MEGEKGKELR RNVEAYGKMA KKALEEGIGS SRKNLDNLIN EFCNNGT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)