AT1G61300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : LRR and NB-ARC domains-containing disease resistance protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 27714 Blast hits to 22073 proteins in 822 species: Archae - 18; Bacteria - 5358; Metazoa - 4578; Fungi - 354; Plants - 16806; Viruses - 2; Other Eukaryotes - 598 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22607714..22610175 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87137.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.74 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 762 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCCFSVQFS FDDQTLVRIF NFLCGNINRN SFGVEERPTQ PTIGQEEMLE KAWNRLMEDR VGIMGLHGMG GVGKTTLFKK IHNKFAKMSS RFDIVIWIVV 101: SKGAKLSKLQ EDIAEKLHLC DDLWKNKNES DKATDIHRVL KGKRFVLMLD DIWEKVDLEA IGVPYPSEVN KCKVAFTTRD QKVCGEMGDH KPMQVKCLEP 201: EDAWELFKNK VGDNTLRSDP VIVELAREVA QKCRGLPLAL SVIGETMASK TMVQEWEHAI DVLTRSAAEF SNMGNKILPI LKYSYDSLGD EHIKSCFLYC 301: ALFPEDDEIY NEKLIDYWIC EGFIGEDQVI KRARNKGYEM LGTLTLANLL TKVGTEHVVM HDVVREMALW IASDFGKQKE NFVVRARVGL HERPEAKDWG 401: AVRRMSLMDN HIEEITCESK CSELTTLFLQ SNQLKNLSGE FIRYMQKLVV LDLSYNRDFN KLPEQISGLV SLQFLDLSNT SIKQLPVGLK KLKKLTFLNL 501: AYTVRLCSIS GISRLLSLRL LRLLGSKVHG DASVLKELQK LQNLQHLAIT LSAELSLNQR LANLISILGI EGFLQKPFDL SFLASMENLS SLWVKNSYFS 601: EIKCRESETA SSYLRINPKI PCFTNLSRLG LSKCHSIKDL TWILFAPNLV YLYIEDSREV GEIINKEKAT NLTSITPFLK LERLILYNLP KLESIYWSPL 701: HFPRLLIIHV LDCPKLRKLP LNATSVPLVE EFQIRMYPPG LGNELEWEDE DTKNRFVLSI KK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)