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AT3G11010.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : receptor like protein 34
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 34 (RLP34); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 142392 Blast hits to 33789 proteins in 1239 species: Archae - 73; Bacteria - 11207; Metazoa - 34063; Fungi - 1634; Plants - 83633; Viruses - 34; Other Eukaryotes - 11748 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:CP002686EnsemblPlants:AT3G11010
EnsemblPlants:AT3G11010.1entrez:820272Gene3D:3.80.10.10GeneID:820272
GO:GO:0016021Gramene:AT3G11010.1hmmpanther:PTHR27004hmmpanther:PTHR27004:SF37
InParanoid:F4J519InterPro:IPR001611InterPro:IPR003591InterPro:IPR013210
InterPro:IPR032675KEGG:ath:AT3G11010OMA:FTINPIAPaxDb:F4J519
Pfam:PF00560Pfam:PF08263Pfam:PF13855PRIDE:F4J519
ProteinModelPortal:F4J519Proteomes:UP000006548RefSeq:NP_187712.2SMART:SM00369
SMR:F4J519STRING:3702.AT3G11010.1SUPFAM:SSF52058TAIR:AT3G11010
tair10-symbols:AtRLP34tair10-symbols:RLP34TMHMM:TMhelixUniGene:At.22181
UniGene:At.39822UniProt:F4J519
Coordinates (TAIR10) chr3:-:3450988..3453672
Molecular Weight (calculated) 99019.40 Da
IEP (calculated) 6.58
GRAVY (calculated) -0.14
Length 894 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGIESHRKT ESWGNNSDCC NWEGVTCNAK SGEVIELNLS CSSLHGRFHS NSSIRNLHFL TTLDRSHNDF EGQITSSIEN LSHLTSLDLS YNRFSGQILN
101: SIGNLSRLTS LDLSFNQFSG QIPSSIGNLS HLTFLGLSGN RFFGQIPSSI GNLSHLTFLG LSGNRFFGQF PSSIGGLSNL TNLHLSYNKY SGQIPSSIGN
201: LSQLIVLYLS VNNFYGEIPS SFGNLNQLTR LDVSFNKLGG NFPNVLLNLT GLSVVSLSNN KFTGTLPPNI TSLSNLMAFY ASDNAFTGTF PSFLFIIPSL
301: TYLGLSGNQL KGTLEFGNIS SPSNLQYLNI GSNNFIGPIP SSISKLINLQ ELGISHLNTQ CRPVDFSIFS HLKSLDDLRL SYLTTTTIDL NDILPYFKTL
401: RSLDLSGNLV SATNKSSVSS DPPSQSIQSL YLSGCGITDF PEILRTQHEL GFLDVSNNKI KGQVPGWLWT LPNLFYLNLS NNTFIGFQRP TKPEPSMAYL
501: LGSNNNFTGK IPSFICELRS LYTLDLSDNN FSGSIPRCME NLKSNLSELN LRQNNLSGGF PEHIFESLRS LDVGHNQLVG KLPRSLRFFS NLEVLNVESN
601: RINDMFPFWL SSLQKLQVLV LRSNAFHGPI NQALFPKLRI IDISHNHFNG SLPTEYFVEW SRMSSLGTYE DGSNVNYLGS GYYQDSMVLM NKGVESELVR
701: ILTIYTAVDF SGNKFEGEIP KSIGLLKELH VLNLSNNAFT GHIPSSIGNL TALESLDVSQ NKLYGEIPQE IGNLSLLSYM NFSHNQLTGL VPGGQQFLTQ
801: RCSSFEGNLG LFGSSLEEVC RDIHTPASHQ QFETPQTEEE DEDLISWIAA AIGFGPGIAF GLMFGYILVS YKPEWFMNPF GRNNRRRKRH TTTH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)