AT3G23110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.466 extracellular 0.464 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 37 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 37 (RLP37); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 38 (TAIR:AT3G23120.1); Has 116481 Blast hits to 31282 proteins in 1091 species: Archae - 43; Bacteria - 8551; Metazoa - 25997; Fungi - 1173; Plants - 71485; Viruses - 19; Other Eukaryotes - 9213 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8222364..8224871 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93223.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.06 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||
| Length | 835 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRNQSRCFL GIIITISFFF FLLSLPNTFA SPTRSLCRSD QRDALLELKK EFPIHSNGSH HVTTLSWNKT VDCCSWEGVT CDATLGEVIS LNLVSYIANT 101: SLKSSSSLFK LRHLRHLELS HCNLQGEIPS SIGNLSHLTY LDLSFNQLVG EFPVSIGNLN QLEYIDLWVN ALGGNIPTSF ANLTKLSELH LRQNQFTGGD 201: IVLSNLTSLS IVDLSSNYFN STISADLSQL HNLERFWVSE NSFFGPFPSF LLMIPSLVDI CLSENQFEGP INFGNTTSSS KLTELDVSYN NLDGLIPKSI 301: STLVSLEHLE LSHNNFRGQV PSSISKLVNL DGLYLSHNNF GGQVPSSIFK LVNLEHLDLS HNDFGGRVPS SISKLVNLSS LDLSYNKFEG HVPQCIWRSS 401: KLDSVDLSYN SFNSFGRILE LGDESLERDW DLSSNSLQGP IPQWICNFRF FSFLDFSNNH LNGSIPQCLK NSTDFYMLNL RNNSLSGFMP DFCMDGSMLG 501: SLDVSLNNLV GKLPESFINC EWMEYLNVRG NKIKDTFPVW LGSLQYLTVL VLRSNTFYGP VYKASAYLGF PSMRIMDISN NNFVGSLPQD YFANWTEMSS 601: VWQRPMLTLD YKRNIAIPGS NYMGDDNHQD SIDLVYKGVD TDFEQIFGGF KVIDFSGNRF SGHIPRSIGL LSELLHLNLS GNAFTGNIPP SLASITKLET 701: LDLSRNNLSG EIPRGLGKLS FLSNINFSHN HLEGLVPQST QFGSQNCSSF MGNPRLYGLD QICGETHVPI PTSLHPEEPL LEPEETVLNW IAAAIAFGPG 801: VFCGLVIGHI FTSYKHKWLM AKFCRNKRKT TIGTS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)