AT3G05660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 33 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 33 (RLP33); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 32 (TAIR:AT3G05650.1); Has 122499 Blast hits to 32804 proteins in 1196 species: Archae - 55; Bacteria - 8957; Metazoa - 28470; Fungi - 1471; Plants - 73451; Viruses - 13; Other Eukaryotes - 10082 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1649258..1652001 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97619.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.10 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||
| Length | 875 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLIPITFYF LFLFFSNFRG VFAVPNIHLC HFEQRDALLE FKNEFKIKKP CFGCPSPLKT KSWENGSDCC HWDGITCDAK TGEVIEIDLM CSCLHGWFHS 101: NSNLSMLQNF HFLTTLDLSY NHLSGQISSS IGNLSHLTTL DLSGNNFSGW IPSSLGNLFH LTSLHLYDNN FGGEIPSSLG NLSYLTFLDL STNNFVGEIP 201: SSFGSLNQLS ILRLDNNKLS GNLPLEVINL TKLSEISLSH NQFTGTLPPN ITSLSILESF SASGNNFVGT IPSSLFTIPS ITLIFLDNNQ LSGTLEFGNI 301: SSPSNLLVLQ LGGNNLRGPI PTSISRLVNL RTLDLSHFNI QGQVDFNIFS HLKLLGNLYL SHSNTTTTID LNAVLSCFKM LISLDLSGNH VLVTNKSSVS 401: DPPLGLIGSL NLSGCGITEF PDILRTQRQM RTLDISNNKI KGQVPSWLLL QLEYMHISNN NFIGFERSTK LEKTVVPKPS MKHFFGSNNN FSGKIPSFIC 501: SLRSLIILDL SNNNFSGAIP PCVGKFKSTL SDLNLRRNRL SGSLPKTIIK SLRSLDVSHN ELEGKLPRSL IHFSTLEVLN VESNRINDTF PFWLSSLKKL 601: QVLVLRSNAF HGRIHKTRFP KLRIIDISRN HFNGTLPSDC FVEWTGMHSL EKNEDRFNEK YMGSGYYHDS MVLMNKGLEM ELVRILKIYT ALDFSGNKFE 701: GEIPRSIGLL KELHILNLSS NGFTGHIPSS MGNLRELESL DVSRNKLSGE IPQELGNLSY LAYMNFSHNQ LVGQVPGGTQ FRTQSASSFE ENLGLCGRPL 801: EECRVVHEPT PSGESETLES EQVLSWIAAA IGFTPGIVLG LTIGHIVLSS KPRWFFKVLY INNSRRRRRT RSEKS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)