AT4G23200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 12 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cysteine-rich receptor-like protein kinase. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 12 (CRK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: vacuole; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 14 (TAIR:AT4G23220.1); Has 120802 Blast hits to 119282 proteins in 4602 species: Archae - 98; Bacteria - 13812; Metazoa - 44469; Fungi - 10443; Plants - 34074; Viruses - 416; Other Eukaryotes - 17490 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12145380..12147934 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72628.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||
| Length | 648 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPLLFLWFFL TSTSLVSALQ TLPCINTTYF IPNSTYDTNR RVILSLLPSN VTSHFGFFNG SIGQAPNRVY AVGMCLPGTE EESCIGCLLS ASNTLLETCL 101: TEENALIWIA NRTICMIRYS DTSFVGSFEL EPHREFLSIH GYKTNETEFN TVWSRLTQRM VQEASSSTDA TWSGAKYYTA DVAALPDSQT LYAMMQCTPD 201: LSPAECNLCL TESVVNYQSC CLGRQGGSIV RLSCAFRAEL YPFGGAFTVM TARPLSQPPP SLIKKGEFFA KFMSNSQEPR KVFNGNYCCN CCSHYSGRYH 301: LLAGITTLHF QQLDFKTIEV ATENFAKTNK LGQGGFGEVY KGTLVNGTEV AVKRLSKTSE QGAQEFKNEV VLVAKLQHRN LVKLLGYCLE PEEKILVYEF 401: VPNKSLDYFL FDPTKQGQLD WTKRYNIIGG ITRGILYLHQ DSRLTIIHRD LKASNILLDA DMIPKIADFG MARISGIDQS VANTKRIAGT FGYMPPEYVI 501: HGQFSMKSDV YSFGVLILEI ICGKKNRSFY QADTKAENLV TYVWRLWTNG SPLELVDLTI SENCQTEEVI RCIHIALLCV QEDPKDRPNL STIMMMLTNS 601: SLILSVPQPP GFFVPQNKER DSFLSSQFTM GCTSQTKNDV TITNLDPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)