AT1G33720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 76, subfamily C, polypeptide 6 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP76C | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 76, subfamily C, polypeptide 6 (CYP76C6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 33801 Blast hits to 33558 proteins in 1715 species: Archae - 57; Bacteria - 3803; Metazoa - 12084; Fungi - 7174; Plants - 9448; Viruses - 6; Other Eukaryotes - 1229 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:12220957..12223981 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57484.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.75 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 511 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDIISGQPLF LIFCFILSCL LFFTTARSRR SPCQLSKSPP GPPRLPIIGN IHLVGKNPHH SFTDLSKTYG PVMSLKLGCL NSVVIASRDA VREVLKTHDQ 101: ILSGRYISEA TKSNNHHEFS VGWIHPSSSR FRMLRKLSAT QLFSPQCIQA TKALRMKKVQ ELVNFLSESC EREEAVDISH VSFVTALNII SNILFSVNLG 201: SYDSKNSSAF QEMVIGYQES IGNPDLANFF PFMRFLDLQG NSKKMRESSG RLLQVFREFY DARIVEKSSR SVEKDVSSKD FLDVLIDLQQ GDETEINIDE 301: IEHLLLDMFV AGTDTNSSTV EWAMAELLGN PKTMTKVQDE INHVIGQNGD FQESDISKLP YLKAVVKETF RLHPAAPFLL QRKAETNVEI LGFTVLKDSQ 401: VLVNVWAIGR DPLVWENPTH FEPERFLGKE IDVKGTDYEL TPFGAGRRIC PGLPLAMKTV HLMLASLLYT FEWKLPNGVG SEDLDMEETF GLTVHKTNPL 501: LAVPLKKRAI N |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)