AT1G22882.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Galactose-binding protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G71360.1); Has 2190 Blast hits to 1928 proteins in 337 species: Archae - 60; Bacteria - 185; Metazoa - 803; Fungi - 277; Plants - 164; Viruses - 19; Other Eukaryotes - 682 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8099150..8101220 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74188.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.83 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.62 | ||||||||||||||||||||||||||||||||||||
| Length | 660 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQRSCRTRRR VSVNKFNGRN SFYKVSLSLV FLLWVLLFFS TLLISHGDGA KDEPLNDSMG MADPDDGQSD EKVVPFDGPL SLASASVDVT SDLSRNDDVN 101: LSEESEDKEQ EAEISSTVSG NDIESKDTYL LKQSEINKKD TGIDAGSKYD DFPKKSEINN TGTWNDTEGK DDNNFLKQSQ LNKTGTGNDT ESSDNEFLEQ 201: NQMNKTVLGN GTEINVSKVD QPSRAVPLGL DEFKSRASNS RNKSLSDQVS GVIHRMEPGG KEYNYASASK GAKVLSSNKE AKGAASILSR DNDKYLRNPC 301: STEGKFVVVE LSEETLVNTI KIANFEHYSS NLKEFELQGT LVYPTDTWVH MGNFTASNVK HEQNFTLLEP KWVRYLKLNF ISHYGSEFYC TLSLIEVYGV 401: DAVERMLEDL ISVQDNKNAY KPREGDSEHK EKPMQQIESL EGDDGADKST HREKEKEAPP ENMLAKTEAS MAKSSNKLSE PVEEMRHHQP GSRMPGDTVL 501: KILMQKLRSL DLNLSILERY LEELNLRYGN IFKEMDREAG VREKAIVALR LDLEGMKERQ EGMVSEAEEM KEWRKRVEAE MEKAEKEKEN IRQSLEQVSK 601: RLEWMEKKCL TVFTVCLGFG IIAVIAVVIG MGTGLAEKTG SGAWLLLLIS STFIMFVLSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)