AT4G32790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.981 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Exostosin family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G25820.1); Has 1344 Blast hits to 1329 proteins in 116 species: Archae - 0; Bacteria - 12; Metazoa - 289; Fungi - 4; Plants - 927; Viruses - 5; Other Eukaryotes - 107 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15812566..15814908 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68635.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||
| Length | 593 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLNLWLREHL VYVCHQQNLV AKFRSQKAMK LLRFAGLVFI FITTFQFVNI RYYGGDIFSL SSQDKFPVSI DVSTEPVSTL SGPERLNSSS SRSVEVDEEE 101: STGLKEDHVI GFDKNDTVQG HDSFVEDVKD KETLDLLPGT KSSSNESYEK IVEDADIAFE NIRKMEILES KSDPSVDNLS SEVKKFMNVS NSGVVSITEM 201: MNLLHQSRTS HVSLKVKRSS TIDHELLYAR TQIENPPLIE NDPLLHTPLY WNLSMFKRSY ELMEKKLKVY VYREGKRPVL HKPVLKGIYA SEGWFMKQLK 301: SSRTFVTKDP RKAHLFYLPF SSKMLEETLY VPGSHSDKNL IQFLKNYLDM ISSKYSFWNK TGGSDHFLVA CHDWAPSETR QYMAKCIRAL CNSDVSEGFV 401: FGKDVALPET TILVPRRPLR ALGGKPVSQR QILAFFAGGM HGYLRPLLLQ NWGGNRDPDM KIFSEIPKSK GKKSYMEYMK SSKYCICPKG HEVNSPRVVE 501: ALFYECVPVI ISDNFVPPFF EVLNWESFAV FVLEKDIPDL KNILVSITEE RYREMQMRVK MVQKHFLWHS KPERFDIFHM ILHSIWYNRV FQI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)