AT1G71360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.484 endoplasmic reticulum 0.296 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Galactose-binding protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G22882.1); Has 1743 Blast hits to 1314 proteins in 210 species: Archae - 22; Bacteria - 165; Metazoa - 539; Fungi - 114; Plants - 96; Viruses - 20; Other Eukaryotes - 787 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:26892214..26894166 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67275.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.15 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||
| Length | 596 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQRSRRALLV RRRVSETTSN GRNRFYKVSL SLVFLIWGLV FLSTLWISHV DGDKGRSLVD SVEKGEPDDE RADETAESVD ATSLESTSVH SNPGLSSDVD 101: IAAAGESKGS ETILKQLEVD NTIVIVGNVT ESKDNVPMKQ SEINNNTVPG NDTETTGSKL DQLSRAVPLG LDEFKSRASN SRDKSLSGQV TGVIHRMEPG 201: GKEYNYAAAS KGAKVLSSNK EAKGASSIIC RDKDKYLRNP CSTEGKFVVI ELSEETLVNT IKIANFEHYS SNLKDFEILG TLVYPTDTWV HLGNFTALNM 301: KHEQNFTFAD PKWVRYLKLN LLSHYGSEFY CTLSLLEVYG VDAVERMLED LISIQDKNIL KLQEGDTEQK EKKTMQAKES FESDEDKSKQ KEKEQEASPE 401: NAVVKDEVSL EKRKLPDPVE EIKHQPGSRM PGDTVLKILM QKIRSLDVSL SVLESYLEER SLKYGMIFKE MDLEASKREK EVETMRLEVE GMKEREENTK 501: KEAMEMRKWR MRVETELEKA ENEKEKVKER LEQVLERLEW MEKKGVVVFT ICVGFGTIAV VAVVFGMGIV RAEKQGGLAW LLLLISSTFV MFILSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)