AT2G31740.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.792 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04610.1); Has 1970 Blast hits to 1936 proteins in 487 species: Archae - 34; Bacteria - 737; Metazoa - 349; Fungi - 54; Plants - 234; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:13491053..13495009 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84784.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.25 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||
| Length | 760 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKKKGNKAA ASTDDFLQTL EDFTSKENWD KFFTLRGNDD SFEWYAEWPQ LHDSLLPLLQ DSSSSSSDSL QILVPGCGNS RLTEHLYDAG FRDITNVDFS 101: KVVISDMLRR NIRTRPELRW RVMDITKMQL ADESFDTVLD KGALDALMEP EVGTKLGNQY LSEAKRVLKP GGKFICLTLA ESHVLALLFS RFRFGWKMNV 201: HSIAQKRSKL KTYMVVAEKE NSVLLHEITS AFELVSLGRN DSQGSGMREA VESENKIRRD CNNGSDLLYS HEDLKLGIKG DLAELTEGRR IKFTLGGQGS 301: NFSYRAVLLD AQKQTEPFVY YCGVFLVPKT RAHEWLFCSE EGQWQVVESS QAARLIMVFL DSSHSGATME DIQNDLSPMV TQLAPRNDDE ARIPYMMASD 401: GIKKRDTVHE VTSPMTGKVV VEDVVYESAP SNLEDLSTSS DLAFRRLVFK RTEGLIQSEA LLVEDGEILE QSQKEKTKNV SQSKRKGNKK QNQEPSRPLM 501: RVSHDYLASS YHTGIISGFT LVSSYLKKAE SCGTMVKTVV IGLGAGLLPM FLHGCLPFFS IEAVELDPVM LSVGKDYFGF TQNDRLKVHI ADGIKFIRDI 601: TNSEASSEES SNIGSNGDST THNTQGGICP DILIIDVDSA DSSGGLTCPA SDFIEETFLL SVKQALPQHG LFIVNLVTRS QSVKDMVVSR MKKVFDHLFG 701: LQLEEEDDVN VVLFGLCSES VISENDIPES AVILEGLLKC QRLETKQSII DATKKLKCWK |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)