AT5G63770.2
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.999 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : diacylglycerol kinase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold. | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:25519755..25522404 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 62180.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.99 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 558 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDDNADMTAF CFYCDEPCGI PFIEASPMWH CLWCQRLIHV KCHMIMSKES GDACDLGSLR RVILSPVHVK LNEANGVDGV LTTIKNELAS IRGHVRRKRH 101: RGKNGNGQSL NGKLLEDSVS DPVKTVVNGL VVKKLRRDRS IDCLKQVSDM PNAKGLQNGI GGHKRNKSAA LNFMKKFSLV DLPPDARPLL VFINAKSGGQ 201: LGPFLHRRLN MLLNPVQVFE LGSCQGPDAG LDLCSKVKYF RVLVCGGDGT VAWVLDAIEK RNFESPPPVA ILPLGTGNDL SRVLQWGRGI SVVDGQGSLR 301: TFLQDIDHAA VTMLDRWSVK IVEESTEKFP AREGHKFMMN YLGIGCDAKV AYEFHMMRQE KPEKFCSQFV NKLRYAKEGA RDIMDRACAD LPWQVWLEVD 401: GKDIEIPKDS EGLIVLNIGS YMGGVDLWQN DYEHDDNFSI QCMHDKTLEV VCVRGAWHLG KLQVGLSQAR RLAQGKVIRI HVSSPFPVQI DGEPFIQQPG 501: CLEITHHGQV FMLRRASDEP RGHAAAIMNE VLLDAECKGV INASQKKVLL QQMALHLS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)