AT5G55130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.772 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : co-factor for nitrate, reductase and xanthine dehydrogenase 5 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative molybdopterin synthase sulphurylase (cnx5) | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
co-factor for nitrate, reductase and xanthine dehydrogenase 5 (CNX5); FUNCTIONS IN: Mo-molybdopterin cofactor sulfurase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040), MoeZ/MoeB (InterPro:IPR007901); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:22373374..22376028 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50576.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.63 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||
| Length | 464 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMSNGGDSSE IVRELEELKL KKAEIEHRIS TLEAKLQDTA AVELYDAVSN GDSYLTAPEL EHGLSPDQIY RYSRQLLLPS FAVEGQSNLL KSSVLVIGAG 101: GLGSPALLYL AACGVGQLGI IDHDVVELNN MHRQIIHTEA FIGHPKVKSA AAACRSINST IKVDEYVEAL RTSNALEILS QYDIIVDATD NPPSRYMISD 201: CCVLLGKPLV SGAALGMEGQ LTVYNHNGGP CYRCLFPTPP PTSACQRCSD SGVLGVVPGV IGCLQALETI KLASLVGEPL SERMLLFDAL SARMRIVKIR 301: GRSSQCTVCG DNSSFNKQTF KDFDYEDFTQ FPLFAGPLNL LPAESRISSK EFKEILQKKE QHVLLDVRPS HHYKIVSLPD SLNIPLANLE TRLNELTSAL 401: KEKGNGHANT ESCTNPSVFV VCRRGNDSQR AVQYLRESGF DSAKDIIGGL EAWAANVNPN FPTY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)