AT5G46850.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.766 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:19010714..19012010 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36845.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.28 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||
| Length | 325 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFFRAATHP DDLRRRVPSP AIMLKSMGSQ RRRSVIALIF ICCAISSTSS DQVGTNYRDS HEFFDSDTIC ISDQYIMESY FTTYTSLDDS EFRNFLLLQQ 101: CSDKVPTQDS NIVPATSFIQ HRNITGEGSH RNLITSIKLL LHHSESQFRE LVIVERLPLG VFADPFELQS LQQRRAFSDV SVFGDTNLEL PSFRSNRSVV 201: EIHVEISSRN YENGEISFKL PLHARYQPLD DSGYSRVEFG EPDLFLCSSH VQNQRRERRR CLVLSIGRSK TETRSVFWDI PAGIRGHTEY VSALTFAAAV 301: FSAFSILVAS VLSSKGESCK NLKQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)