AT5G38970.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : brassinosteroid-6-oxidase 1 | ||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized. | ||||||||||||||||
| Computational Description (TAIR10) |
brassinosteroid-6-oxidase 1 (BR6OX1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: brassinosteroid-6-oxidase 2 (TAIR:AT3G30180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:15594935..15597465 | ||||||||||||||||
| Molecular Weight (calculated) | 44587.00 Da | ||||||||||||||||
| IEP (calculated) | 8.52 | ||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||
| Length | 384 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSEVNRYIL KNESKGLVPG YPQSMLDILG TCNMAAVHGS SHRLMRGSLL SLISSTMMRD HILPKVDHFM RSYLDQWNEL EVIDIQDKTK HMAFLSSLTQ 101: IAGNLRKPFV EEFKTAFFKL VVGTLSVPID LPGTNYRCGI QARNNIDRLL RELMQERRDS GETFTDMLGY LMKKEGNRYP LTDEEIRDQV VTILYSGYET 201: VSTTSMMALK YLHDHPKALQ ELRAEHLAFR ERKRQDEPLG LEDVKSMKFT RAVIYETSRL ATIVNGVLRK TTRDLEINGY LIPKGWRIYV YTREINYDAN 301: LYEDPLIFNP WRWMKKSLES QNSCFVFGGG TRLCPGKELG IVEISSFLHY FVTRYRWEEI GGDELMVFPR VFAPKGFHLR ISPY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)