AT1G52750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G80280.1); Has 5685 Blast hits to 5671 proteins in 1064 species: Archae - 73; Bacteria - 4042; Metazoa - 263; Fungi - 116; Plants - 432; Viruses - 0; Other Eukaryotes - 759 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19646785..19649208 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70298.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.42 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.13 | ||||||||||||||||||||||||||||||||||||
| Length | 633 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAWKSWIVA EKARRCLRTM FFVAAMTASL LASSLPVLIT VADVVVPCLI VSSITCLTCH SPAQHFRQYS FKTSLIDVPL VSLIRSLVII CLSWLCEDTR 101: LAYGLYLETV MLSSFGGILL LLVKTCVFTV NSTLEEAKVY HLKISWGMPV LLLSSAVFGL AHVVVAYRKS CGARRKLMYH KIDQEAVLSC KSGFSGYKKA 201: HRQSFTRSNC KILTFAGEFR QKSFRGTSLD REELLQPRLL ANADSLFIKI QGLYVHYKQR TSPSVSSFVI ISDSAAEMNA RRSRLLDKQM SNLTSQTQNS 301: HFHRSYTIQP DRSSLYDPLL ASHNTTPISL FDKDGVNQIN SIKLGDDMEK DENTGIVLVH GFGGGVFSWR HVMGELSLQL GCRVVAYDRP GWGLTSRLIR 401: KDWEKRNLAN PYKLESQVDL LLSFCSEMGF SSVILVGHDD GGLLALKAAE RMQASTSKHN ITIKGVVLIN VSLSREVVPA FARILLHTSL RKKHLVRPLL 501: RTEITQLVNR RAWCDTTKLT TDITMLYKAP LCLEAWDEAL NEISKLSYEM ILSPQNASAL VKSIGDLPVL VVAGAEDALV PLKSSQVLAS KLTNSRLVEI 601: SGCGHLPHEE CPTTLVSALG SFICRLIPKL PNS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)