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AT5G24970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10001 Blast hits to 9972 proteins in 1791 species: Archae - 126; Bacteria - 4383; Metazoa - 406; Fungi - 470; Plants - 723; Viruses - 14; Other Eukaryotes - 3879 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-512-MONOMERBioCyc:ARA:GQT-513-MONOMEReggNOG:COG0661eggNOG:KOG1235
EMBL:BT004318EMBL:BT008522EMBL:CP002688EnsemblPlants:AT5G24970
EnsemblPlants:AT5G24970.1entrez:832567ExpressionAtlas:Q84W22GeneID:832567
GO:GO:0004672GO:GO:0005524Gramene:AT5G24970.1hmmpanther:PTHR10566
hmmpanther:PTHR10566:SF70HOGENOM:HOG000232962InterPro:IPR000719InterPro:IPR004147
InterPro:IPR011009Pfam:PF03109Pfscan:PS50011PhylomeDB:Q84W22
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_197879.2SMR:Q84W22
STRING:3702.AT5G24970.2SUPFAM:SSF56112TAIR:AT5G24970TMHMM:TMhelix
UniGene:At.30936UniProt:Q84W22
Coordinates (TAIR10) chr5:-:8604358..8608663
Molecular Weight (calculated) 81200.70 Da
IEP (calculated) 9.64
GRAVY (calculated) -0.07
Length 719 amino acids
Sequence (TAIR10)
(BLAST)
001: MRNAVVALRH HRRVSLLRRI VAFRDDNTIC LSPSLKNNEL SRQTNSWVSP FCLQRRAYST GFTSVHGGIP TAEYAKLRRE SLETEFGHAL GAYSSKSFSA
101: VYRFGPFLAL YRAAIISYHV VKLAFWQLFV QDMRKRAVKF RETLISLGPF YIKALSTRPD ILPSIYCQEL SKLQDQIPPF PTTVAMRCIE EQLGAPVSKL
201: FADISLKPVA AASLGQVYKA HLHSGQLVAV KVQRPGMSLI LTRDALLFKM IGGQLKRFAK ARKDLLVAVN EMVRHMFDEI DYVLEAKNAE RFASLYSFDS
301: GNEQIDDNAG PRNMSRNHRA ENIKVPKIYW NFTRTAVLTM EWIDGIKLTD EIKLKRASLD RRDLIDQGLS CSLKQLLEVG FFHADPHPGN LVATKEGSLV
401: YFDFGMMGNI PRHYRVGLIQ ILVHFVNRDS LSLANDFLSL GFLPEGVDIQ AVSNALRTSF GSTTRISQDF QGVMEQLYDV MYEFNFSLPP DYALVIRSLG
501: SLEGTAKILD PEFKVIESAY PFVIGRLLAD PSPDMRKILR ELVICNDGSI RWNRLERLVA AISEQASATS GDSPEDKTLK KSSELKSFDM HSVVSATEDL
601: LLFILSEKGQ RVRVFLLQDI IRVVDIFLEV EALELNKTIN LKTEEGTMKR VSNGFKGLSE AVKLAPGMWI SMLLRMSRKS EVHSYALDIV SALSTHFGHK
701: VPHTCWILLS KLLHHNKSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)