AT5G19580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glyoxal oxidase-related protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G67290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:6607595..6609517 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65000.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.93 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||
| Length | 594 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKASTRVIWT ISVLMLAAVS EAIFPLPFLP FLPGFNNGFR DNEAVKVAKP QPAGAVGGKA ARRQRGGGLD AQTTWGGKWE LFLENSGVSG MHAILMPVIN 101: KVQYYDATIW RISKIKLPPG VPCHVVDAKT NKVDCWAHSI LMDVNTGALK PLGLSTDTWC SSGGLTVNGT LVSTGGYGGG ANTARYLSSC ENCKWEEYPQ 201: ALAAKRWYST QATLPDGKFF VIGGRDALNY EYIPEEGQNN RKLFDSLLLR QTDDPEENNL YPFVWLNTDG NLFIFANNRS ILLSPKTNQV IKEFPQLPGG 301: ARNYPGSGSS ALLPIQLYVK NPKVIPAEVL VCGGSKQDAY YKAGKKIYEP ALQDCARIRI NSAKPRWKTE MMPTPRIMSD TVILPNGDIL LVNGAKRGCS 401: GWGYGKDPAF APLLYKPHAA RGKRFRQLKP TTIPRMYHSS AIILPDGKVL VGGSNTNDGY KYNVEFPTEL RVEKFSPPYL DPALANIRPK IVTTGTPKQV 501: KYGQFFNVKV DLKEKGATKG NLKVTMLAPA FTTHSISMNM RMLILGVNNV KPAGAGYDIQ AVAPPNGNIA PPGYYLIFAI YKGVPSTGEW IQVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)