AT4G22540.4
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.805 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : OSBP(oxysterol binding protein)-related protein 2A | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:11860969..11863886 | ||||||||||||
| Molecular Weight (calculated) | 58157.90 Da | ||||||||||||
| IEP (calculated) | 5.53 | ||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||
| Length | 510 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNENLVKECE QIMLSEFSEM HGQVKLLHEE RTNLLDALRQ LEAANLEVGA SGKHEFSSLG RGKYSECSTT ASSDGKQEFE DVSEEDEPSF HDTKEFFNEP 101: NIGSESNLAI SGHTDIKRRT KLPDPAEKEK GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDRAYE HGKSGNGLLR ALNVAAFAVS 201: GYASTEGRHC KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QVEPVGVLTL EFDDGEVFQW SKVTSTIYNI 301: ILGKLYCDHH GVMQIRGNRQ YSCTLKFKEQ SILERNPHQV NGFVEDVAGQ KAATIFGKWD DSLYYVAGDG INKSKVSDPA SNASLLWKRT KPPPNVTRYN 401: LTSFAITLNE LTPGLQEILP PTDSRLRPDQ RHLENGEYEK ANLEKQRLER RQRMSRQLQE SGWRPRWFER QGESDTFKYT GGYWEARGHR NWDDCPDIFG 501: EFTEELADAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)