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AT4G21230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 27
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 27 (CRK27); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 26 (TAIR:AT4G38830.1); Has 120175 Blast hits to 118702 proteins in 4414 species: Archae - 114; Bacteria - 13808; Metazoa - 44281; Fungi - 10127; Plants - 33876; Viruses - 432; Other Eukaryotes - 17537 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G21230-MONOMEREC:2.7.11.-EMBL:AL021960EMBL:AL161554
EMBL:CP002687EnsemblPlants:AT4G21230EnsemblPlants:AT4G21230.1entrez:827872
Gene3D:2.60.120.200GeneID:827872Genevisible:O49564GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0006468GO:GO:0006952
GO:GO:0009506GO:GO:0016021Gramene:AT4G21230.1hmmpanther:PTHR27002
HOGENOM:HOG000116550InParanoid:O49564InterPro:IPR000719InterPro:IPR001245
InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441KEGG:ath:AT4G21230OMA:RICLAQIPaxDb:O49564
Pfam:O49564Pfam:PF01657Pfam:PF07714Pfscan:PS50011
Pfscan:PS51473PhylomeDB:O49564PIR:T04954PRIDE:O49564
PRO:PR:O49564PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51473ProteinModelPortal:O49564Proteomes:UP000006548RefSeq:NP_193855.2
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:O49564
SUPFAM:SSF56112TAIR:AT4G21230tair10-symbols:CRK27TMHMM:TMhelix
UniGene:At.50359UniProt:O49564
Coordinates (TAIR10) chr4:-:11319244..11321679
Molecular Weight (calculated) 71939.10 Da
IEP (calculated) 6.66
GRAVY (calculated) -0.14
Length 642 amino acids
Sequence (TAIR10)
(BLAST)
001: MASTSIMLSS FFSFFFLTFF VTYAQQNVTV HTICYYDGGN FTSNTSYSLN LNRLISSLPD LTPTINGFYN ISINGEVNAI ALCRGDVKPN QDCISCITTA
101: AKQLVESCPN IIEANIWLEK CMFRYTSRII LGQMEPVPFS YTSSNVSVTD KEGFSKGLGD LLDSLGAKID AANETKEVKF AAGVKGTIYA LAQCTPDLSE
201: SDCRICLAQI FAGVPTCCDG KTGGWWTNPS CYFRFEVYPF FDLSVTSEQK QPLSSHNNNT RRSDQGKSKD RSKTLIFAVV PIVAIILGLV FLFIYLKRRR
301: KKKTLKENAE NEFESTDSLH FDFETIRVAT DDFSLTNKIG EGGFGVVYKG HLPDGLEIAV KRLSIHSGQG NAEFKTEVLL MTKLQHKNLV KLFGFSIKES
401: ERLLVYEFIP NTSLDRFLFD PIKQKQLDWE KRYNIIVGVS RGLLYLHEGS EFPIIHRDLK SSNVLLDEQM LPKISDFGMA RQFDFDNTQA VTRRVVGTYG
501: YMAPEYAMHG RFSVKTDVYS FGVLVLEIIT GKRNSGLGLG EGTDLPTFAW QNWIEGTSME LIDPVLLQTH DKKESMQCLE IALSCVQENP TKRPTMDSVV
601: SMLSSDSESR QLPKPSQPGF FRRSASFSIS LNDVSLTDLS AR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)