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AT3G03773.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.780
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HSP20-like chaperones superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G02450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioGrid:6492DNASU:821159eggNOG:ENOG41121RTeggNOG:KOG3158
EMBL:AC009540EMBL:AY648332EMBL:AY648333EMBL:AY954843
EMBL:BT014803EMBL:BT015020EMBL:CP002686EnsemblPlants:AT3G03773
EnsemblPlants:AT3G03773.1entrez:821159EvolutionaryTrace:Q6ID70ExpressionAtlas:Q6ID70
Gene3D:2.60.40.790GeneID:821159hmmpanther:PTHR22932hmmpanther:PTHR22932:SF7
HOGENOM:HOG000177563InParanoid:Q6ID70InterPro:IPR007052InterPro:IPR008978
PaxDb:Q6ID70PDB:2KMWPDBsum:2KMWPfam:PF04969
Pfam:Q6ID70Pfscan:PS51203PhylomeDB:Q6ID70PRIDE:Q6ID70
PRO:PR:Q6ID70PROSITE:PS51203ProteinModelPortal:Q6ID70Proteomes:UP000006548
Reactome:R-ATH-2162123Reactome:R-ATH-3371511Reactome:R-ATH-3371568RefSeq:NP_683525.2
SMR:Q6ID70STRING:3702.AT3G03773.2SUPFAM:SSF49764TAIR:AT3G03773
UniGene:At.45139UniProt:Q6ID70
Coordinates (TAIR10) chr3:+:951885..953490
Molecular Weight (calculated) 17367.10 Da
IEP (calculated) 4.33
GRAVY (calculated) -0.75
Length 150 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRNPEVLWA QRSDKVYLTV ALPDAKDISV KCEPQGLFSF SALGAQGERF EFSLELYGKI MTEYRKNVGL RNIIFSIQKE ERSWWTRLLK SEEKPAPYIK
101: VDWNKWCDED EEVNSETASD DESAFVNQDS ESSDDDGLLY LPDLEKARNK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)