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AT5G63135.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J52YeggNOG:ENOG410YXAYEMBL:AY086834EMBL:BT028950
EMBL:CP002688EnsemblPlants:AT5G63135EnsemblPlants:AT5G63135.1entrez:836434
GeneID:836434GO:GO:0005680GO:GO:0090266Gramene:AT5G63135.1
hmmpanther:PTHR37771hmmpanther:PTHR37771:SF1HOGENOM:HOG000070874InterPro:IPR026182
KEGG:ath:AT5G63135ncoils:CoilOMA:QWPQPHSPfam:PF15243
PhylomeDB:Q8LC33Proteomes:UP000006548RefSeq:NP_568965.1TAIR:AT5G63135
UniGene:At.29013UniGene:At.65868UniProt:Q8LC33
Coordinates (TAIR10) chr5:-:25325253..25326440
Molecular Weight (calculated) 11232.80 Da
IEP (calculated) 3.48
GRAVY (calculated) -0.88
Length 99 amino acids
Sequence (TAIR10)
(BLAST)
1: MLQFPTLMTQ FPSSTKTIPA SYLLPLQWPQ PQNEEILLAM EEAEFEEKCN EIRKMSPALP VIGKPVVNNE QEEDDNEAED DDADNAEESD GEEFEQETG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)