AT3G03530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : non-specific phospholipase C4 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
non-specific phospholipase C4 (NPC4); FUNCTIONS IN: hydrolase activity, acting on ester bonds, phospholipase C activity; INVOLVED IN: phospholipid catabolic process; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C5 (TAIR:AT3G03540.1); Has 2107 Blast hits to 2050 proteins in 380 species: Archae - 32; Bacteria - 1750; Metazoa - 0; Fungi - 127; Plants - 153; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:842686..844970 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60726.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 538 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIETTKGGSG SYPIKTIVVL VQENRSFDHT LGWFKELNRE IDGVTKSDPK SNTVSSSDTN SLRVVFGDQS QYVNPDPGHS IQDIYEQVFG KPWDSGKPDP 101: NPGHPNMSGF AQNAERNKKG MSSAVMNGFK PNALPVYKEL VQNFAICDRW FASVPASTQP NRLYVHSATS HGATSNDKKL LLEGFPQKTI FESLDEAGFS 201: FGIYYQFPPS TLFYRNLRKL KYLTHFHQYG IQFKKDCKEG KLPNYVVVEQ RWFDLLSTPA NDDHPSHDVS EGQKLVKEVY EALRSSPQWN EILFIITYDE 301: HGGFYDHVPT PVDGVPNPDG ILGPPPYNFE FNRLGVRVPT FFISPWIEPG TVIHGPNGPY PRSQYEHSSI PATVKTIFKL KDFLSKRDSW AGTFESVITR 401: DSPRQDCPET LSTPIKLRGT MAKENAQLSE FQEDLVIMAA GLKGDYKNEE LIHKLCKETC VADASKYVTN AFEKFLEESR KARDRGCDEN DIVYCVDDDD 501: DHVVIPPQSH SEASNAAAQP KTQTSFFNKL FSCFIRHD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)