AT2G24645.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.972 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : Transcriptional factor B3 family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT4G00260.1). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr2:-:10480728..10482650 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 55533.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.79 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 490 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MANQHFFKPL LPGFHTHLRI PVAFFLKNIE GRYEQKTAEL RSDASKITWE VKIDGQRLTD GWKEFALSHD LRIGDIVVFR QERDMSFHVT MLGPSCCEIQ 101: YGSCSDEERN LEKKKNPNGE AKSSSLDPSC FSANVAPSSL RYDLMLFPMG FVRENGVVGS GKIVLMNEKG RSWNFNLRQK PSCGTVYVRG GWVSFCDANG 201: LQAGDIYTFK LIKRGGTLVL RLLPKGAESC SLDPSCFVAN VAPSTLRYDT LYLPKRFMRE NGVDKRRGEM ILMNEKGKSW TLDLKLKKSC GTSLIRRGWR 301: SFCSANGLRA GSIITFKLIK KSGTLVLCLL SNEPEEEVCS EANEVESLST DQESHEESSH NEKISRRKEK KGRMIWKASS SPSENRFVTL NLTPYNILRS 401: ALRLPIPFTR MNGINEETKM TLLDKHGMKW LTTLRLVDYK RKRLGMVGGW KGFIQANGVK ANESIMLELI WEEETSCVLK FCSKVKLAIK |
||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)