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AT2G22790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.945
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 111 Blast hits to 111 proteins in 33 species: Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IW9ZeggNOG:ENOG4111KG5EMBL:AC005617EMBL:CP002685
EMBL:DQ446551EnsemblPlants:AT2G22790EnsemblPlants:AT2G22790.1entrez:816809
GeneID:816809Gramene:AT2G22790.1hmmpanther:PTHR32011hmmpanther:PTHR32011:SF3
KEGG:ath:AT2G22790OMA:VFQIDGDPhylomeDB:O82400PIR:H84616
Proteomes:UP000006548RefSeq:NP_179864.1STRING:3702.AT2G22790.1TAIR:AT2G22790
UniGene:At.52870UniProt:O82400
Coordinates (TAIR10) chr2:+:9695932..9696909
Molecular Weight (calculated) 36790.20 Da
IEP (calculated) 5.41
GRAVY (calculated) -0.46
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MNHRLAGIIS PLGHITTDPI RSSSVNPSSP VYYKTIVNHF KSQTGNHVSP GLTNQEISAV ESSHGFSFPL DLRSILQTGL PVGTNFPNWR TGSNRNNLLL
101: PLLNLSQHVV RNGFWVDSWG IRPGNDAEAL SLVKKLIEIA PVLVPVYGDF YVPSTTPNLA GNPVFQIDGD GVRELSCDVV GFLKGIGRSE TPTEDRRRRR
201: RPRRVEFWSD VAEGWRFVVA RDYTRDWWSA LGFEGLTACL DDAFWKLREA GWTEDDVRDM MMMDSVDQNT CIQQQTQTQS RDVVYAFGDE GMNERDRDTC
301: TEDEDHQKGE VTTLRHLLLY DRLMS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)