AT1G79670.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.946 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Wall-associated kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120550 Blast hits to 118930 proteins in 4262 species: Archae - 142; Bacteria - 13516; Metazoa - 44650; Fungi - 10334; Plants - 33695; Viruses - 488; Other Eukaryotes - 17725 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29976887..29979337 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79435.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.96 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 714 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKRRRLFFSV LLSILTLFIN GPLITTAQSP PSSSTSCNRI CGGIEIPFPF GIGRRDCFLN DWYEVVCNST TSGKSLAPFL YKINRELVSI TLRSSIDSSY 101: GVVHIKSPVT SSGCSQRPVK PLPLNLTGKG SPFFITDSNR LVSVGCQAKI PADRPQVIGV DLESSGGNTT QGGNCKVAFL TNETYSPANV TEPEQFYTNG 201: FTVIELGWYF DTSDSRLTNP VGCVNLTETG IYTSAPSCVC EYGNFSGFGY SNCYCNQIGY RGNPYLPGGC IDIDECEEGK GLSSCGELTC VNVPGSWRCE 301: LNGVGKIKPL FPGLVLGFPL LFLVLGIWGL IKFVKKRRKI IRKRMFFKRN GGLLLKQQLT TRGGNVQSSK IFSSKELEKA TDNFNMNRVL GQGGQGTVYK 401: GMLVDGRIVA VKRSKVLDED KVEEFINEVG VLSQINHRNI VKLMGCCLET EVPILVYEHI PNGDLFKRLH HDSDDYTMTW DVRLRISVEI AGALAYLHSA 501: ASTPVYHRDV KTTNILLDEK YRAKVSDFGT SRSINVDQTH LTTLVAGTFG YLDPEYFQTS QFTDKSDVYS FGVVLVELIT GEKPFSVMRP EENRGLVSHF 601: NEAMKQNRVL DIVDSRIKEG CTLEQVLAVA KLARRCLSLK GKKRPNMREV SVELERIRSS PEDLELHIEE EDEEECAMEI NMDDSWSVDM TAPASLFDLS 701: PKLDVEPLVP QRTW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)