AT1G78955.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.720 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : camelliol C synthase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
camelliol C synthase 1 (CAMS1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G78950.1); Has 2110 Blast hits to 1948 proteins in 563 species: Archae - 2; Bacteria - 929; Metazoa - 122; Fungi - 243; Plants - 611; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29689153..29694255 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88160.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.88 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 769 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR 101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA 201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN 301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD 401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM 501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE 601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP 701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)