AT1G78940.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.813 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G16760.1). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29680854..29683985 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84191.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.91 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 754 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWLPKANGAK KETGSGSVAV AIDKDKGSQH ALKWTIDNLA SRGQTISLIH VLCRSHSSSD LEEGTPQQKQ QMEKIAKDLF VSFHCYCSRK EINCRDILLE 101: DADKVRAITE YVSSSAIENL VVGSASRNGF MRRFKTDLPT TVSKSAPDFC NVYVISKGKI ASVRNASRPA PYQNSMQQCE IDNHHPHTPD KAPKYHDHPN 201: SAGSTPSRPR KSVEADRSPL VKRKPYGDFY DSDSDLSFIS PSSHRDSDIS FISSGRPSVE RSSFSLDFPE SARTSRMSTS SEQSIGSNRL GIKFSDPDFL 301: NESSTFSEES GRTSSYSSQS LDDVEAEMKR LRLELKQTMD MYSTACKEAL SARQQATELQ KLRTEEERRL EEAKSSEEAA MSIVEKERAK AKAALEAAEA 401: AKRLAEVESK RRLTAEMKTM KESDSFSRGF VRYRKYTVDE IEEATSNFAE SQKVGEGGYG PVFRGFLDHT SVAVKVLRPD AAQGRSQFQK EVEVLSCIRH 501: PNMVLLLGAC PEFGILVYEY MAKGSLEDRL FMRGNTPPIT WQLRFRIAAE IATGLLFLHQ TKPEPIVHRD LKPGNVLLDY NYVSKISDVG LARLVPAVAE 601: NVTQYRVTSA AGTFCYIDPE YQQTGMLGVK SDVYSLGIML LQILTAKQPM GLAYYVEQAI EEGTLKDMLD PAVPDWPIEE ALSLAKLSLQ CAELRRKDRP 701: DLGKEILPEL NRLREIGEES LESVFYAGNQ GKSPNTSQAH NGFEQSILYL LKNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)