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AT1G63270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : non-intrinsic ABC protein 10
Curator
Summary (TAIR10)
Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.
Computational
Description (TAIR10)
non-intrinsic ABC protein 10 (NAP10); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, haem export, CcmA (InterPro:IPR005895); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 3 (TAIR:AT1G67940.1); Has 360446 Blast hits to 338127 proteins in 3858 species: Archae - 6408; Bacteria - 294085; Metazoa - 7445; Fungi - 3734; Plants - 4292; Viruses - 13; Other Eukaryotes - 44469 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G63270-MONOMERBioGrid:27854EC:3.6.3.41eggNOG:COG4133
eggNOG:ENOG410IPJHEMBL:AC022355EMBL:CP002684EnsemblPlants:AT1G63270
EnsemblPlants:AT1G63270.1entrez:842633Gene3D:3.40.50.300GeneID:842633
GO:GO:0005215GO:GO:0005524GO:GO:0006810GO:GO:0015439
GO:GO:0017004GO:GO:0030288GO:GO:0043190Gramene:AT1G63270.1
hmmpanther:PTHR24220hmmpanther:PTHR24220:SF508InParanoid:Q9C8T1IntAct:Q9C8T1
InterPro:IPR003439InterPro:IPR003593InterPro:IPR005895InterPro:IPR027417
KEGG:ath:AT1G63270OMA:PPTECLEPaxDb:Q9C8T1Pfam:PF00005
Pfam:Q9C8T1Pfscan:PS50893Pfscan:PS51243PhylomeDB:Q9C8T1
PIR:E96658PRIDE:Q9C8T1PRO:PR:Q9C8T1PROSITE:PS50893
PROSITE:PS51243ProteinModelPortal:Q9C8T1Proteomes:UP000006548RefSeq:NP_176516.1
SMART:SM00382SMR:Q9C8T1STRING:3702.AT1G63270.1SUPFAM:SSF52540
TAIR:AT1G63270tair10-symbols:ATNAP10tair10-symbols:NAP10TCDB:3.A.1.107.2
TIGRfam:TIGR01189TIGRFAMs:TIGR01189UniGene:At.68096UniProt:Q9C8T1
Coordinates (TAIR10) chr1:-:23469664..23470353
Molecular Weight (calculated) 25977.20 Da
IEP (calculated) 10.51
GRAVY (calculated) -0.08
Length 229 amino acids
Sequence (TAIR10)
(BLAST)
001: MSIRRPQIPR LLLQNVSCMR NAQQILRHVN VSLHDGGALV LTGTNGSGKS TFLRMLAGFS KPSAGEILWN GHDITQSGIF QQYKLQLNWI SLKDAIKERF
101: TVLDNVQWFE LLENKIGKAQ PALELMGLGR LVKEKSRMLS MGQRKRLQLA RLLAIDRPIW LLDEPSVALD DEGVRLLEYI IAEHRKKGGI VIVATHLPID
201: IEDAMILRLP PRFPRKMTLI DMLDRADIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)