AT1G61180.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : LRR and NB-ARC domains-containing disease resistance protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22551486..22554185 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 102817.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.74 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 899 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSCFSLQVS DQTLNRIFNC LIGKSYIRTL EKNLRALQRE MEDLRAIQHE VQNKVARDEA RHQRRLEAVQ VWLDRVNSVD IECKDLLSVT PVELQKLCLC 101: GLCSKYVCSS YKYGKKVFLL LEEVKKLNSE GNFDEVSQPP PRSEVEERPT QPTIGQEDML EKAWNRLMED GVGIMGLHGM GGVGKTTLFK KIHNKFAEIG 201: GTFDIVIWIV VSKGVMISKL QEDIAEKLHL CDDLWKNKNE SDKATDIHRV LKGKRFVLML DDIWEKVDLE AIGIPYPSEV NKCKVAFTTR SREVCGEMGD 301: HKPMQVNCLE PEDAWELFKN KVGDNTLSSD PVIVELAREV AQKCRGLPLA LNVIGETMSS KTMVQEWEHA IHVFNTSAAE FSDMQNKILP ILKYSYDSLG 401: DEHIKSCFLY CALFPEDGEI YNEKLIDYWI CEGFIGEDQV IKRARNKGYA MLGTLTRANL LTKVGTYYCV MHDVVREMAL WIASDFGKQK ENFVVQAGVG 501: LHEIPKVKDW GAVRKMSLMD NDIEEITCES KCSELTTLFL QSNKLKNLPG AFIRYMQKLV VLDLSYNRDF NKLPEQISGL VSLQFLDLSN TSIEHMPIGL 601: KELKKLTFLD LTYTDRLCSI SGISRLLSLR LLRLLGSKVH GDASVLKELQ QLQNLQELAI TVSAELISLD QRLAKLISNL CIEGFLQKPF DLSFLASMEN 701: LSSLRVENSY FSEIKCRESE TESSYLRINP KIPCFTNLSR LEIMKCHSMK DLTWILFAPN LVVLLIEDSR EVGEIINKEK ATNLTSITPF LKLEWLILYN 801: LPKLESIYWS PLPFPVLLTM DVSNCPKLRK LPLNATSVSK VEEFEIHMYP PPEQENELEW EDDDTKNRFL PSIKPVIISF NLLCLSYLYF LLMFLSRLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)