AT1G61180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : LRR and NB-ARC domains-containing disease resistance protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 24701 Blast hits to 21254 proteins in 830 species: Archae - 23; Bacteria - 2777; Metazoa - 4902; Fungi - 437; Plants - 15881; Viruses - 0; Other Eukaryotes - 681 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22551486..22554330 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 101679.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.74 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 889 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSCFSLQVS DQTLNRIFNC LIGKSYIRTL EKNLRALQRE MEDLRAIQHE VQNKVARDEA RHQRRLEAVQ VWLDRVNSVD IECKDLLSVT PVELQKLCLC 101: GLCSKYVCSS YKYGKKVFLL LEEVKKLNSE GNFDEVSQPP PRSEVEERPT QPTIGQEDML EKAWNRLMED GVGIMGLHGM GGVGKTTLFK KIHNKFAEIG 201: GTFDIVIWIV VSKGVMISKL QEDIAEKLHL CDDLWKNKNE SDKATDIHRV LKGKRFVLML DDIWEKVDLE AIGIPYPSEV NKCKVAFTTR SREVCGEMGD 301: HKPMQVNCLE PEDAWELFKN KVGDNTLSSD PVIVELAREV AQKCRGLPLA LNVIGETMSS KTMVQEWEHA IHVFNTSAAE FSDMQNKILP ILKYSYDSLG 401: DEHIKSCFLY CALFPEDGEI YNEKLIDYWI CEGFIGEDQV IKRARNKGYA MLGTLTRANL LTKVGTYYCV MHDVVREMAL WIASDFGKQK ENFVVQAGVG 501: LHEIPKVKDW GAVRKMSLMD NDIEEITCES KCSELTTLFL QSNKLKNLPG AFIRYMQKLV VLDLSYNRDF NKLPEQISGL VSLQFLDLSN TSIEHMPIGL 601: KELKKLTFLD LTYTDRLCSI SGISRLLSLR LLRLLGSKVH GDASVLKELQ QLQNLQELAI TVSAELISLD QRLAKLISNL CIEGFLQKPF DLSFLASMEN 701: LSSLRVENSY FSEIKCRESE TESSYLRINP KIPCFTNLSR LEIMKCHSMK DLTWILFAPN LVVLLIEDSR EVGEIINKEK ATNLTSITPF LKLEWLILYN 801: LPKLESIYWS PLPFPVLLTM DVSNCPKLRK LPLNATSVSK VEEFEIHMYP PPEQENELEW EDDDTKNRFL PSIKPYKYFV YPGMSFLTV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)