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AT1G49860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase (class phi) 14
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase (class phi) 14 (GSTF14); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase phi 8 (TAIR:AT2G47730.1); Has 13689 Blast hits to 13671 proteins in 1440 species: Archae - 0; Bacteria - 7396; Metazoa - 2236; Fungi - 608; Plants - 1504; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G49860-MONOMERBioGrid:26634EC:2.5.1.18eggNOG:ENOG410INUJ
eggNOG:ENOG41117ZSEMBL:AC079674EMBL:AK176306EMBL:BT010408
EMBL:CP002684EnsemblPlants:AT1G49860EnsemblPlants:AT1G49860.1entrez:841409
Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:841409Genevisible:Q9C6C8
GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749
GO:GO:0009407GO:GO:0009636Gramene:AT1G49860.1hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF201HOGENOM:HOG000125746InParanoid:Q9C6C8IntAct:Q9C6C8
InterPro:IPR004045InterPro:IPR004046InterPro:IPR010987InterPro:IPR012336
KEGG:ath:AT1G49860KO:K00799OMA:NHIVDLMPaxDb:Q9C6C8
Pfam:PF00043Pfam:PF02798Pfam:Q9C6C8Pfscan:PS50404
Pfscan:PS50405PhylomeDB:Q9C6C8PIR:E96535PRIDE:Q9C6C8
PRO:PR:Q9C6C8PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9C6C8
Proteomes:UP000006548RefSeq:NP_175408.1SMR:Q9C6C8STRING:3702.AT1G49860.1
SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G49860tair10-symbols:ATGSTF14
tair10-symbols:GSTF14UniGene:At.38148UniProt:Q9C6C8
Coordinates (TAIR10) chr1:+:18458710..18459730
Molecular Weight (calculated) 28820.90 Da
IEP (calculated) 5.06
GRAVY (calculated) -0.20
Length 254 amino acids
Sequence (TAIR10)
(BLAST)
001: MADSKMKLHC GFIWGNSAAL FCINEKGLDF ELVFVDWLAG EAKTKTFLST LNPFGEVPVL EDGDLKLFEP KAITRYLAEQ YKDVGTNLLP DDPKKRAIMS
101: MWMEVDSNQF LPIASTLIKE LIINPYQGLA TDDTAVQENK EKLSEVLNIY ETRLGESPYL AGESFSLADL HHLAPIDYLL NTDEEELKNL IYSRPNVAAW
201: VEKMKMRPAW LKTVVMKNHI VDLMKQRRLP IKLDSSCHES TVVAQKNAIA IENK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)