AT1G11540.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.978 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Sulfite exporter TauE/SafE family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Sulfite exporter TauE/SafE family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G61740.1); Has 3200 Blast hits to 2964 proteins in 743 species: Archae - 110; Bacteria - 1734; Metazoa - 0; Fungi - 0; Plants - 195; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:3875476..3876973 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40275.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.46 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.62 | ||||||||||||||||||||||||||||
| Length | 367 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTIIAGLEMK TASSFSAFMV TGVSFANVGC NLFLRNPKSR DKTLIDFDLA LTIQPCLLLG VSIGVICNRM FPNWLVLFLF AVFLAWSTMK TCKKGVSYWN 101: LESERAKIKS PRDVDGIEVA RSPLLSEERE DVRQRGMIRF PWMKLGVLVI IWLLFFSINL FRGNKYGQGI ISIKPCGALY WFLSSLQIPL TIFFTLCIYF 201: SDNVQSNHTS HSNQNSEQET GVGGRQNKLM LPVMALLAGV LGGLFGIGGG MLISPLLLQI GIAPEVTAAT CSFMVLFSSS MSAIQYLLLG MEHAGTAAIF 301: ALVCFVASLV GLMVVKKVIA KYGRASIIVF AVGIVMALST VLMTTHGAFN VWNDFVSGRY MGFKLPC |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)