AT1G03990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Long-chain fatty alcohol dehydrogenase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 3131 Blast hits to 2994 proteins in 799 species: Archae - 23; Bacteria - 2103; Metazoa - 14; Fungi - 174; Plants - 167; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:1024847..1027616 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83868.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.34 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 758 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVGGRRLGKR GSPLLRWSVK QESFSHGFSK SDLQALSSIC DAIMPPVPLE SLNLEMKLKV LRNDALLSFF KSSSSESHVR PDEVAELLAT KAIPLTVLVV 101: RIVLRILTFR LGTLLLCGLV CLDKKHWPFL LKFSEMSLEK REKVLQRWNT QWYNPLARIG FMMIKAIFLF YYFTWTNENS ENPVWDAINY SVEIGENEDM 201: EQKERPLDEG IIETAKEDEM TIKQRMINKG LKVTEDRERD TYKIECDAVV VGSGCGGGVA AAILAKSGLR VVVIEKGNYF APRDYSALEG PSMFELFESN 301: SLMMTHDGRF RFMAGSTVGG GSVVNWAASL KTPDAIIEEW SVHRGISIYS SEKYKAAMGI VCKRLGVTEK IIREGFQNQI LRKGCEKLGL DVTIVPRNST 401: EKHYCGSCSY GCPTGEKRGT DSTWLVDAVN NNAVILTQCK AEKLILADND ANKREESGRR KRCLGVAASL SHQTRKKLQI NAKVTIVACG SLKTPGLLAS 501: SGLKNSNISR GLHIHPIMMA WGYFPEKNSE LEGAAHEGEI VTSLHYVHPM DSTTPNITLE TPAIGPGTFA ALTPWVSGSD MKERMAKYAR TAHIFAMVRD 601: EGVGEVKGDI VKYRLTKADE ENLTIGLKQA LRILVAAGAA EVGTYRSDGQ RMKCDGIKQK DLEAFLDTVN APPGVVSMSK HWTQSFTAHQ IGCCRMGATE 701: KEGAIDGKGE SWEAEDLYVC DASVLPTALG VNPMITVQST AYCISNRIAE LMKKRKKD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)