TY  - JOUR
AU  - Bin Li, Daisuke Takahashi, Yukio Kawamura, Matsuo Uemura
TI  - Plasma membrane proteome analyses of Arabidopsis thaliana suspension-cultured cells during cold or ABA treatment: Relationship with freezing tolerance and growth phase.
JA  - J Proteomics
PY  - 2020///
VL  - 211
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Thomas Nietzel, Jörg Mostertz, Cristina Ruberti, Guillaume Née, Philippe Fuchs, Stephan Wagner, Anna Moseler, Stefanie J Müller-Schüssele, Abdelilah Benamar, Gernot Poschet, Michael Büttner, Ian Max Møller, Christopher H Lillig, David Macherel, Markus Wirtz, Rüdiger Hell, Iris Finkemeier, Andreas J Meyer, Falko Hochgräfe, Markus Schwarzländer
TI  - Redox-mediated kick-start of mitochondrial energy metabolism drives resource-efficient seed germination.
JA  - Proc Natl Acad Sci U S A
PY  - 2020///
VL  - 117
IS  - 1
UR  - None
SP  - 741
EP  - 751
ER  - 

TY  - JOUR
AU  - Oliver Trentmann, Timo Mühlhaus, David Zimmer, Frederik Sommer, Michael Schroda, Ilka Haferkamp, Isabel Keller, Benjamin Pommerrenig, Horst Ekkehard Neuhaus
TI  - Identification of Chloroplast Envelope Proteins with Critical Importance for Cold Acclimation.
JA  - Plant Physiol
PY  - 2020///
VL  - 182
IS  - 3
UR  - None
SP  - 1239
EP  - 1255
ER  - 

TY  - JOUR
AU  - Philippe Fuchs, Nils Rugen, Chris Carrie, Marlene Elsässer, Iris Finkemeier, Jonas Giese, Tatjana M Hildebrandt, Kristina Kühn, Veronica G Maurino, Cristina Ruberti, Mareike Schallenberg-Rüdinger, Janina Steinbeck, Hans-Peter Braun, Holger Eubel, Etienne H Meyer, Stefanie J Müller-Schüssele, Markus Schwarzländer
TI  - Single organelle function and organization as estimated from Arabidopsis mitochondrial proteomics.
JA  - Plant J
PY  - 2020///
VL  - 101
IS  - 2
UR  - None
SP  - 420
EP  - 441
ER  - 

TY  - JOUR
AU  - Minna M Koskela, Annika Brünje, Aiste Ivanauskaite, Laura S Lopez, Dominik Schneider, Rachael A DeTar, Hans-Henning Kunz, Iris Finkemeier, Paula Mulo
TI  - Comparative analysis of thylakoid protein complexes in state transition mutants nsi and stn7: focus on PSI and LHCII.
JA  - Photosynth Res
PY  - 2020///
VL  - 145
IS  - 1
UR  - None
SP  - 15
EP  - 30
ER  - 

TY  - JOUR
AU  - Markus Niehaus, Henryk Straube, Patrick Künzler, Nils Rugen, Jan Hegermann, Patrick Giavalisco, Holger Eubel, Claus-Peter Witte, Marco Herde
TI  - Rapid Affinity Purification of Tagged Plant Mitochondria (Mito-AP) for Metabolome and Proteome Analyses.
JA  - Plant Physiol
PY  - 2020///
VL  - 182
IS  - 3
UR  - None
SP  - 1194
EP  - 1210
ER  - 

TY  - JOUR
AU  - Franziska Kuhnert, Anja Stefanski, Nina Overbeck, Leonie Drews, Andreas S Reichert, Kai Stühler, Andreas P M Weber
TI  - Rapid Single-Step Affinity Purification of HA-Tagged Plant Mitochondria.
JA  - Plant Physiol
PY  - 2020///
VL  - 182
IS  - 2
UR  - None
SP  - 692
EP  - 706
ER  - 

TY  - JOUR
AU  - Rubén Fernández-Santos, Yovanny Izquierdo, Ana López, Luis Muñiz, Marta Martínez, Tomás Cascón, Mats Hamberg, Carmen Castresana
TI  - Protein Profiles of Lipid Droplets during the Hypersensitive Defense Response of Arabidopsis against Pseudomonas Infection.
JA  - Plant Cell Physiol
PY  - 2020///
VL  - 61
IS  - 6
UR  - None
SP  - 1144
EP  - 1157
ER  - 

TY  - JOUR
AU  - Daisuke Takahashi, Michal Gorka, Alexander Erban, Alexander Graf, Joachim Kopka, Ellen Zuther, Dirk K Hincha
TI  - Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana.
JA  - Sci Rep
PY  - 2019///
VL  - 9
IS  - 1
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Peter Schäfer, Stefan Helm, Daniel Köhler, Birgit Agne, Sacha Baginsky
TI  - Consequences of impaired 1-MDa TIC complex assembly for the abundance and composition of chloroplast high-molecular mass protein complexes.
JA  - PLoS One
PY  - 2019///
VL  - 14
IS  - 3
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Imen Bouchnak, Sabine Brugière, Lucas Moyet, Sophie Le Gall, Daniel Salvi, Marcel Kuntz, Marianne Tardif, Norbert Rolland
TI  - Unraveling Hidden Components of the Chloroplast Envelope Proteome: Opportunities and Limits of Better MS Sensitivity.
JA  - Mol Cell Proteomics
PY  - 2019///
VL  - 18
IS  - 7
UR  - None
SP  - 1285
EP  - 1306
ER  - 

TY  - JOUR
AU  - Andrea Trotta, Azfar Ali Bajwa, Ilaria Mancini, Virpi Paakkarinen, Mathias Pribil, Eva-Mari Aro
TI  - The Role of Phosphorylation Dynamics of CURVATURE THYLAKOID 1B in Plant Thylakoid Membranes.
JA  - Plant Physiol
PY  - 2019///
VL  - 181
IS  - 4
UR  - None
SP  - 1615
EP  - 1631
ER  - 

TY  - JOUR
AU  - Nils Rugen, Henryk Straube, Linda E Franken, Hans-Peter Braun, Holger Eubel
TI  - Complexome Profiling Reveals Association of PPR Proteins with Ribosomes in the Mitochondria of Plants.
JA  - Mol Cell Proteomics
PY  - 2019///
VL  - 18
IS  - 7
UR  - None
SP  - 1345
EP  - 1362
ER  - 

TY  - JOUR
AU  - Yushi Miki, Daisuke Takahashi, Yukio Kawamura, Matsuo Uemura
TI  - Temporal proteomics of Arabidopsis plasma membrane during cold- and de-acclimation.
JA  - J Proteomics
PY  - 2019///
VL  - 197
IS  - 
UR  - None
SP  - 71
EP  - 81
ER  - 

TY  - JOUR
AU  - Zachary McBride, Donglai Chen, Youngwoo Lee, Uma K Aryal, Jun Xie, Daniel B Szymanski
TI  - A Label-free Mass Spectrometry Method to Predict Endogenous Protein Complex Composition.
JA  - Mol Cell Proteomics
PY  - 2019///
VL  - 18
IS  - 8
UR  - None
SP  - 1588
EP  - 1606
ER  - 

TY  - JOUR
AU  - Chieko Goto, Shoko Hashizume, Yoichiro Fukao, Ikuko Hara-Nishimura, Kentaro Tamura
TI  - Comprehensive nuclear proteome of Arabidopsis obtained by sequential extraction.
JA  - Nucleus
PY  - 2019///
VL  - 10
IS  - 1
UR  - None
SP  - 81
EP  - 92
ER  - 

TY  - JOUR
AU  - Harold Duruflé, Philippe Ranocha, Thierry Balliau, Christophe Dunand, Elisabeth Jamet
TI  - Transcriptomic and cell wall proteomic datasets of rosettes and floral stems from five 
JA  - Data Brief
PY  - 2019///
VL  - 27
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Thembisile G Khoza, Ian A Dubery, Lizelle A Piater
TI  - Identification of Candidate Ergosterol-Responsive Proteins Associated with the Plasma Membrane of Arabidopsis thaliana .
JA  - Int J Mol Sci
PY  - 2019///
VL  - 20
IS  - 6
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Barbara De Smet, Patrick Willems, Alvaro D Fernandez-Fernandez, Saleh Alseekh, Alisdair R Fernie, Joris Messens, Frank Van Breusegem
TI  - In vivo detection of protein cysteine sulfenylation in plastids.
JA  - Plant J
PY  - 2019///
VL  - 97
IS  - 4
UR  - None
SP  - 765
EP  - 778
ER  - 

TY  - JOUR
AU  - Minna M Koskela, Annika Brünje, Aiste Ivanauskaite, Magda Grabsztunowicz, Ines Lassowskat, Ulla Neumann, Trinh V Dinh, Julia Sindlinger, Dirk Schwarzer, Markus Wirtz, Esa Tyystjärvi, Iris Finkemeier, Paula Mulo
TI  - Chloroplast Acetyltransferase NSI Is Required for State Transitions in 
JA  - Plant Cell
PY  - 2018///
VL  - 30
IS  - 8
UR  - None
SP  - 1695
EP  - 1709
ER  - 

TY  - JOUR
AU  - Jesús Beltrán, Yashitola Wamboldt, Robersy Sanchez, Evan W LaBrant, Hardik Kundariya, Kamaldeep S Virdi, Christian Elowsky, Sally A Mackenzie
TI  - Specialized Plastids Trigger Tissue-Specific Signaling for Systemic Stress Response in Plants.
JA  - Plant Physiol
PY  - 2018///
VL  - 178
IS  - 2
UR  - None
SP  - 672
EP  - 683
ER  - 

TY  - JOUR
AU  - Peitong Wang, Xi Chen, Xuan Xu, Chenni Lu, Wei Zhang, Fang-Jie Zhao
TI  - ARSENATE INDUCED CHLOROSIS 1/ TRANSLOCON AT THE OUTER ENVOLOPE MEMBRANE OF CHLOROPLASTS 132 Protects Chloroplasts from Arsenic Toxicity.
JA  - Plant Physiol
PY  - 2018///
VL  - 178
IS  - 4
UR  - None
SP  - 1568
EP  - 1583
ER  - 

TY  - JOUR
AU  - Jennifer Senkler, Michael Senkler, Holger Eubel, Tatjana Hildebrandt, Christian Lengwenus, Peter Schertl, Markus Schwarzländer, Stephan Wagner, Ilka Wittig, Hans-Peter Braun
TI  - The mitochondrial complexome of Arabidopsis thaliana.
JA  - Plant J.
PY  - 2017///
VL  - 89
IS  - 6
UR  - http://dx.doi.org/10.1111/tpj.13448
SP  - 1079
EP  - 1092
ER  - 

TY  - JOUR
AU  - Adélaïde Jacq, Clémentine Pernot, Yves Martinez, Frédéric Domergue, Bruno Payré, Elisabeth Jamet, Vincent Burlat, Valérie B Pacquit
TI  - The Arabidopsis Lipid Transfer Protein 2 (AtLTP2) Is Involved in Cuticle-Cell Wall Interface Integrity and in Etiolated Hypocotyl Permeability.
JA  - Front Plant Sci
PY  - 2017///
VL  - 8
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Allen Yi-Lun Tsai, Tadashi Kunieda, Jason Rogalski, Leonard J Foster, Brian E Ellis, George W Haughn
TI  - Identification and Characterization of Arabidopsis Seed Coat Mucilage Proteins.
JA  - Plant Physiol.
PY  - 2017///
VL  - 173
IS  - 2
UR  - None
SP  - 1059
EP  - 1074
ER  - 

TY  - JOUR
AU  - Harold Duruflé, Hélène San Clemente, Thierry Balliau, Michel Zivy, Christophe Dunand, Elisabeth Jamet
TI  - Cell wall proteome analysis of Arabidopsis thaliana mature stems.
JA  - Proteomics
PY  - 2017///
VL  - 17
IS  - 8
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Islam Mostafa, Mi-Jeong Yoo, Ning Zhu, Sisi Geng, Craig Dufresne, Maged Abou-Hashem, Maher El-Domiaty, Sixue Chen
TI  - Membrane Proteomics of Arabidopsis Glucosinolate Mutants cyp79B2/B3 and myb28/29.
JA  - Front Plant Sci
PY  - 2017///
VL  - 8
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Lysiane Brocard, Françoise Immel, Denis Coulon, Nicolas Esnay, Karine Tuphile, Stéphanie Pascal, Stéphane Claverol, Laëtitia Fouillen, Jean-Jacques Bessoule, Claire Bréhélin
TI  - Proteomic Analysis of Lipid Droplets from Arabidopsis Aging Leaves Brings New Insight into Their Biogenesis and Functions.
JA  - Front Plant Sci
PY  - 2017///
VL  - 8
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Max E Kraner, Carmen Müller, Uwe Sonnewald
TI  - Comparative proteomic profiling of the choline transporter-like1 (CHER1) mutant provides insights into plasmodesmata composition of fully developed Arabidopsis thaliana leaves.
JA  - Plant J
PY  - 2017///
VL  - 92
IS  - 4
UR  - None
SP  - 696
EP  - 709
ER  - 

TY  - JOUR
AU  - Harold Duruflé, Vincent Hervé, Philippe Ranocha, Thierry Balliau, Michel Zivy, Josiane Chourré, Hélène San Clemente, Vincent Burlat, Cécile Albenne, Sébastien Déjean, Elisabeth Jamet, Christophe Dunand
TI  - Cell wall modifications of two Arabidopsis thaliana ecotypes, Col and Sha, in response to sub-optimal growth conditions: An integrative study.
JA  - Plant Sci
PY  - 2017///
VL  - 263
IS  - 
UR  - None
SP  - 183
EP  - 193
ER  - 

TY  - JOUR
AU  - Charlotte Montacié, Nathalie Durut, Alison Opsomer, Denise Palm, Pascale Comella, Claire Picart, Marie-Christine Carpentier, Frederic Pontvianne, Christine Carapito, Enrico Schleiff, Julio Sáez-Vásquez
TI  - Nucleolar Proteome Analysis and Proteasomal Activity Assays Reveal a Link between Nucleolus and 26S Proteasome in 
JA  - Front Plant Sci
PY  - 2017///
VL  - 8
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Yan Wang, Xiaoli Peng, Zhuojun Yang, Weiwei Zhao, Wentao Xu, Junran Hao, Weihong Wu, Xiao Li Shen, Yunbo Luo, Kunlun Huang
TI  - iTRAQ Mitoproteome Analysis Reveals Mechanisms of Programmed Cell Death in Arabidopsis thaliana Induced by Ochratoxin A.
JA  - Toxins (Basel)
PY  - 2017///
VL  - 9
IS  - 5
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Cornelius S Vilakazi, Ian A Dubery, Lizelle A Piater
TI  - Identification of lipopolysaccharide-interacting plasma membrane-type proteins in Arabidopsis thaliana.
JA  - Plant Physiol Biochem
PY  - 2017///
VL  - 111
IS  - 
UR  - None
SP  - 155
EP  - 165
ER  - 

TY  - JOUR
AU  - Huan Nguyen-Kim, Hélène San Clemente, Thierry Balliau, Michel Zivy, Christophe Dunand, Cécile Albenne, Elisabeth Jamet
TI  - Arabidopsis thaliana root cell wall proteomics: Increasing the proteome coverage using a combinatorial peptide ligand library and description of unexpected Hyp in peroxidase amino acid sequences.
JA  - Proteomics
PY  - 2016///
VL  - 16
IS  - 3
UR  - http://doi.org/10.1002/pmic.201500129
SP  - 491
EP  - 503
ER  - 

TY  - JOUR
AU  - Roberto de Michele, Heather E McFarlane, Harriet T Parsons, Miranda J Meents, Jeemeng Lao, Susana M González Fernández-Niño, Christopher J Petzold, Wolf B Frommer, A Lacey Samuels, Joshua L Heazlewood
TI  - Free-Flow Electrophoresis of Plasma Membrane Vesicles Enriched by Two-Phase Partitioning Enhances the Quality of the Proteome from Arabidopsis Seedlings.
JA  - J Proteome Res
PY  - 2016///
VL  - 15
IS  - 3
UR  - http://doi.org/10.1021/acs.jproteome.5b00876
SP  - 900
EP  - 913
ER  - 

TY  - JOUR
AU  - Joanna Melonek, Svenja Oetke, Karin Krupinska
TI  - Multifunctionality of plastid nucleoids as revealed by proteome analyses.
JA  - Biochim. Biophys. Acta
PY  - 2016///
VL  - 1864
IS  - 8
UR  - http://dx.doi.org/10.1016/j.bbapap.2016.03.009
SP  - 1016
EP  - 1038
ER  - 

TY  - JOUR
AU  - Steffanie Fromm, Jennifer Senkler, Holger Eubel, Christoph Peterhänsel, Hans-Peter Braun
TI  - Life without complex I: proteome analyses of an Arabidopsis mutant lacking the mitochondrial NADH dehydrogenase complex.
JA  - J. Exp. Bot.
PY  - 2016///
VL  - 67
IS  - 10
UR  - http://dx.doi.org/10.1093/jxb/erw165
SP  - 3079
EP  - 3093
ER  - 

TY  - JOUR
AU  - Zainab Fakih, Md Bulbul Ahmed, Claire Letanneur, Hugo Germain
TI  - An unbiased nuclear proteomics approach reveals novel nuclear protein components that participates in MAMP-triggered immunity.
JA  - Plant Signal Behav
PY  - 2016///
VL  - 11
IS  - 6
UR  - http://dx.doi.org/10.1080/15592324.2016.1183087
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Elke Ströher, Julia Grassl, Chris Carrie, Ricarda Fenske, James Whelan, A Harvey Millar
TI  - Glutaredoxin S15 Is Involved in Fe-S Cluster Transfer in Mitochondria Influencing Lipoic Acid-Dependent Enzymes, Plant Growth, and Arsenic Tolerance in Arabidopsis.
JA  - Plant Physiol.
PY  - 2016///
VL  - 170
IS  - 3
UR  - None
SP  - 1284
EP  - 1299
ER  - 

TY  - JOUR
AU  - Emanuela Pedrazzini, Andrea Caprera, Ilaria Fojadelli, Alessandra Stella, Alessandra Rocchetti, Barbara Bassin, Enrico Martinoia, Alessandro Vitale
TI  - The Arabidopsis tonoplast is almost devoid of glycoproteins with complex N-glycans, unlike the rat lysosomal membrane.
JA  - J. Exp. Bot.
PY  - 2016///
VL  - 67
IS  - 6
UR  - None
SP  - 1769
EP  - 1781
ER  - 

TY  - JOUR
AU  - Jing Wang, Qingbo Yu, Haibo Xiong, Jun Wang, Sixue Chen, Zhongnan Yang, Shaojun Dai
TI  - Proteomic Insight into the Response of Arabidopsis Chloroplasts to Darkness.
JA  - PLoS One
PY  - 2016///
VL  - 11
IS  - 5
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Nazmul H Bhuiyan, Giulia Friso, Elden Rowland, Kristina Majsec, Klaas J van Wijk
TI  - The Plastoglobule-Localized Metallopeptidase PGM48 Is a Positive Regulator of Senescence in Arabidopsis thaliana.
JA  - Plant Cell
PY  - 2016///
VL  - 28
IS  - 12
UR  - None
SP  - 3020
EP  - 3037
ER  - 

TY  - JOUR
AU  - Viviana Correa-Galvis, Gereon Poschmann, Michael Melzer, Kai Stühler, Peter Jahns
TI  - PsbS interactions involved in the activation of energy dissipation in Arabidopsis.
JA  - Nat Plants
PY  - 2016///
VL  - 2
IS  - 
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - William Heard, Jan Sklenář, Daniel F A Tomé, Silke Robatzek, Alexandra M E Jones
TI  - Identification of Regulatory and Cargo Proteins of Endosomal and Secretory Pathways in Arabidopsis thaliana by Proteomic Dissection.
JA  - Mol Cell Proteomics
PY  - 2015///
VL  - 14
IS  - 7
UR  - http://doi.org/10.1074/mcp.M115.050286
SP  - 1796
EP  - 1813
ER  - 

TY  - JOUR
AU  - Xu Wang, Xiaolong Ma, Hui Wang, Bingjie Li, Greg Clark, Yi Guo, Stan Roux, Daye Sun, Wenqiang Tang
TI  - Proteomic study of microsomal proteins reveals a key role for Arabidopsis annexin 1 in mediating heat stress-induced increase in intracellular calcium levels.
JA  - Mol Cell Proteomics
PY  - 2015///
VL  - 14
IS  - 3
UR  - http://doi.org/10.1074/mcp.M114.042697
SP  - 686
EP  - 694
ER  - 

TY  - JOUR
AU  - Sajad Majeed Zargar, Rie Kurata, Shoko Inaba, Akira Oikawa, Risa Fukui, Yoshiyuki Ogata, Ganesh Kumar Agrawal, Randeep Rakwal, Yoichiro Fukao
TI  - Quantitative proteomics of Arabidopsis shoot microsomal proteins reveals a cross-talk between excess zinc and iron deficiency.
JA  - Proteomics
PY  - 2015///
VL  - 15
IS  - 7
UR  - http://doi.org/10.1002/pmic.201400467
SP  - 1196
EP  - 1201
ER  - 

TY  - JOUR
AU  - Estefanía Uberegui, Michael Hall, Óscar Lorenzo, Wolfgang P Schröder, Mónica Balsera
TI  - An Arabidopsis soluble chloroplast proteomic analysis reveals the participation of the Executer pathway in response to increased light conditions.
JA  - J Exp Bot
PY  - 2015///
VL  - 66
IS  - 7
UR  - http://doi.org/10.1093/jxb/erv018
SP  - 2067
EP  - 2077
ER  - 

TY  - JOUR
AU  - Agnieszka Szuba, Anna Kasprowicz-Maluśki, Przemysław Wojtaszek
TI  - Nitration of plant apoplastic proteins from cell suspension cultures.
JA  - J Proteomics
PY  - 2015///
VL  - 120
IS  - 
UR  - http://doi.org/10.1016/j.jprot.2015.03.002
SP  - 158
EP  - 168
ER  - 

TY  - JOUR
AU  - Maureen Hummel, Thomas Dobrenel, Jan J H G Cordewener, Marlène Davanture, Christian Meyer, Sjef J C M Smeekens, Julia Bailey-Serres, Twan A H P America, Johannes Hanson
TI  - Proteomic LC-MS analysis of Arabidopsis cytosolic ribosomes: Identification of ribosomal protein paralogs and re-annotation of the ribosomal protein genes.
JA  - J Proteomics
PY  - 2015///
VL  - 128
IS  - 
UR  - http://doi.org/10.1016/j.jprot.2015.07.004
SP  - 436
EP  - 449
ER  - 

TY  - JOUR
AU  - Witold G Szymanski, Henrik Zauber, Alexander Erban, Michal Gorka, Xu Na Wu, Waltraud X Schulze
TI  - Cytoskeletal Components Define Protein Location to Membrane Microdomains.
JA  - Mol Cell Proteomics
PY  - 2015///
VL  - 14
IS  - 9
UR  - http://doi.org/10.1074/mcp.M114.046904
SP  - 2493
EP  - 2509
ER  - 

TY  - JOUR
AU  - Lan Yin, Alexander V Vener, Cornelia Spetea
TI  - The membrane proteome of stroma thylakoids from Arabidopsis thaliana studied by successive in-solution and in-gel digestion.
JA  - Physiol Plant
PY  - 2015///
VL  - 154
IS  - 3
UR  - http://doi.org/10.1111/ppl.12308
SP  - 433
EP  - 446
ER  - 

TY  - JOUR
AU  - Anna Rita Trentin, Micaela Pivato, Syed M M Mehdi, Leonard Ebinezer Barnabas, Sabrina Giaretta, Marta Fabrega-Prats, Dinesh Prasad, Giorgio Arrigoni, Antonio Masi
TI  - Proteome readjustments in the apoplastic space of Arabidopsis thaliana ggt1 mutant leaves exposed to UV-B radiation.
JA  - Front Plant Sci
PY  - 2015///
VL  - 6
IS  - 
UR  - http://doi.org/10.3389/fpls.2015.00128
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Shaobai Huang, Clark J Nelson, Lei Li, Nicolas L Taylor, Elke Ströher, Jakob Peteriet, A Harvey Millar
TI  - INTERMEDIATE CLEAVAGE PEPTIDASE55 Modifies Enzyme Amino Termini and Alters Protein Stability in Arabidopsis Mitochondria.
JA  - Plant Physiol
PY  - 2015///
VL  - 168
IS  - 2
UR  - None
SP  - 415
EP  - 427
ER  - 

TY  - JOUR
AU  - Grzegorz Konert, Andrea Trotta, Petri Kouvonen, Moona Rahikainen, Guido Durian, Olga Blokhina, Kurt Fagerstedt, Dorota Muth, Garry L Corthals, Saijaliisa Kangasjärvi
TI  - Protein phosphatase 2A (PP2A) regulatory subunit B'γ interacts with cytoplasmic ACONITASE 3 and modulates the abundance of AOX1A and AOX1D in Arabidopsis thaliana.
JA  - New Phytol
PY  - 2015///
VL  - 205
IS  - 3
UR  - None
SP  - 1250
EP  - 1263
ER  - 

TY  - JOUR
AU  - Nighat Sultana, Hannah V Florance, Alex Johns, Nicholas Smirnoff
TI  - Ascorbate deficiency influences the leaf cell wall glycoproteome in Arabidopsis thaliana.
JA  - Plant Cell Environ.
PY  - 2015///
VL  - 38
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24393051
SP  - 375
EP  - 384
ER  - 

TY  - JOUR
AU  - Ann-Christine König, Markus Hartl, Paul J Boersema, Matthias Mann, Iris Finkemeier
TI  - The mitochondrial lysine acetylome of Arabidopsis.
JA  - Mitochondrion
PY  - 2014///
VL  - 19 Pt B
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24727099
SP  - 252
EP  - 260
ER  - 

TY  - JOUR
AU  - Rachel B Rodrigues, Gregorz Sabat, Benjamin B Minkoff, Heather L Burch, Thao T Nguyen, Michael R Sussman
TI  - Expression of a translationally fused TAP-tagged plasma membrane proton pump in Arabidopsis thaliana.
JA  - Biochemistry
PY  - 2014///
VL  - 53
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24397334
SP  - 566
EP  - 578
ER  - 

TY  - JOUR
AU  - Zhiping Deng, Juan A Oses-Prieto, Ulrich Kutschera, Tong-Seung Tseng, Lingzhao Hao, Alma L Burlingame, Zhi-Yong Wang, Winslow R Briggs
TI  - Blue light-induced proteomic changes in etiolated Arabidopsis seedlings.
JA  - J. Proteome Res.
PY  - 2014///
VL  - 13
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24712693
SP  - 2524
EP  - 2533
ER  - 

TY  - JOUR
AU  - Xiao-Ning Zhang, Cecilia Mo, Wesley M Garrett, Bret Cooper
TI  - Phosphothreonine 218 is required for the function of SR45.1 in regulating flower petal development in Arabidopsis.
JA  - Plant Signal Behav
PY  - 2014///
VL  - 9
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24832081
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Stefan Helm, Dirk Dobritzsch, Anja Rödiger, Birgit Agne, Sacha Baginsky
TI  - Protein identification and quantification by data-independent acquisition and multi-parallel collision-induced dissociation mass spectrometry (MS(E)) in the chloroplast stroma proteome.
JA  - J Proteomics
PY  - 2014///
VL  - 98
IS  - 
UR  - http://doi.org/10.1016/j.jprot.2013.12.007
SP  - 79
EP  - 89
ER  - 

TY  - JOUR
AU  - Nino Nikolovski, Pavel V Shliaha, Laurent Gatto, Paul Dupree, Kathryn S Lilley
TI  - Label-free protein quantification for plant Golgi protein localization and abundance.
JA  - Plant Physiol
PY  - 2014///
VL  - 166
IS  - 2
UR  - http://doi.org/10.1104/pp.114.245589
SP  - 1033
EP  - 1043
ER  - 

TY  - JOUR
AU  - Fabien Sénéchal, Lucile Graff, Ogier Surcouf, Paulo Marcelo, Catherine Rayon, Sophie Bouton, Alain Mareck, Gregory Mouille, Annick Stintzi, Herman Höfte, Patrice Lerouge, Andreas Schaller, Jérôme Pelloux
TI  - Arabidopsis PECTIN METHYLESTERASE17 is co-expressed with and processed by SBT3.5, a subtilisin-like serine protease.
JA  - Ann Bot
PY  - 2014///
VL  - 114
IS  - 6
UR  - http://doi.org/10.1093/aob/mcu035
SP  - 1161
EP  - 1175
ER  - 

TY  - JOUR
AU  - Martino Tomizioli, Cosmin Lazar, Sabine Brugière, Thomas Burger, Daniel Salvi, Laurent Gatto, Lucas Moyet, Lisa M Breckels, Anne-Marie Hesse, Kathryn S Lilley, Daphné Seigneurin-Berny, Giovanni Finazzi, Norbert Rolland, Myriam Ferro
TI  - Deciphering thylakoid sub-compartments using a mass spectrometry-based approach.
JA  - Mol Cell Proteomics
PY  - 2014///
VL  - 13
IS  - 8
UR  - http://doi.org/10.1074/mcp.M114.040923
SP  - 2147
EP  - 2167
ER  - 

TY  - JOUR
AU  - Claude Alban, Marianne Tardif, Morgane Mininno, Sabine Brugière, Annabelle Gilgen, Sheng Ma, Meryl Mazzoleni, Océane Gigarel, Jacqueline Martin-Laffon, Myriam Ferro, Stéphane Ravanel
TI  - Uncovering the protein lysine and arginine methylation network in Arabidopsis chloroplasts.
JA  - PLoS One
PY  - 2014///
VL  - 9
IS  - 4
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Arnoud J Groen, Gloria Sancho-Andrés, Lisa M Breckels, Laurent Gatto, Fernando Aniento, Kathryn S Lilley
TI  - Identification of trans-golgi network proteins in Arabidopsis thaliana root tissue.
JA  - J Proteome Res
PY  - 2014///
VL  - 13
IS  - 2
UR  - None
SP  - 763
EP  - 776
ER  - 

TY  - JOUR
AU  - Wenjuan Wu, Ying Zhu, Zhaoxue Ma, Yi Sun, Quan Quan, Peng Li, Pengzhan Hu, Tieliu Shi, Clive Lo, Ivan K Chu, Jirong Huang
TI  - Proteomic evidence for genetic epistasis: ClpR4 mutations switch leaf variegation to virescence in Arabidopsis.
JA  - Plant J
PY  - 2013///
VL  - 76
IS  - 6
UR  - None
SP  - 943
EP  - 956
ER  - 

TY  - JOUR
AU  - Peter K Lundquist, Anton Poliakov, Lisa Giacomelli, Giulia Friso, Mason Appel, Ryan P McQuinn, Stuart B Krasnoff, Elden Rowland, Lalit Ponnala, Qi Sun, Klaas J van Wijk
TI  - Loss of plastoglobule kinases ABC1K1 and ABC1K3 causes conditional degreening, modified prenyl-lipids, and recruitment of the jasmonic acid pathway.
JA  - Plant Cell
PY  - 2013///
VL  - 25
IS  - 5
UR  - None
SP  - 1818
EP  - 1839
ER  - 

TY  - JOUR
AU  - Henrik Zauber, Witold Szymanski, Waltraud X Schulze
TI  - Unraveling sterol-dependent membrane phenotypes by analysis of protein abundance-ratio distributions in different membrane fractions under biochemical and endogenous sterol depletion.
JA  - Mol Cell Proteomics
PY  - 2013///
VL  - 12
IS  - 12
UR  - None
SP  - 3732
EP  - 3743
ER  - 

TY  - JOUR
AU  - Clark J Nelson, Lei Li, Richard P Jacoby, A Harvey Millar
TI  - Degradation rate of mitochondrial proteins in Arabidopsis thaliana cells.
JA  - J Proteome Res
PY  - 2013///
VL  - 12
IS  - 7
UR  - None
SP  - 3449
EP  - 3459
ER  - 

TY  - JOUR
AU  - Daniela Gargano, Jodi Maple-Grødem, Veronika Reisinger, Lutz Andreas Eichacker, Simon Geir Møller
TI  - Analysis of the chloroplast proteome in arc mutants and identification of novel protein components associated with FtsZ2.
JA  - Plant Mol Biol
PY  - 2013///
VL  - 81
IS  - 3
UR  - None
SP  - 235
EP  - 244
ER  - 

TY  - JOUR
AU  - Yuki Sakamoto, Shingo Takagi
TI  - LITTLE NUCLEI 1 and 4 Regulate Nuclear Morphology in Arabidopsis thaliana.
JA  - Plant Cell Physiol.
PY  - 2013///
VL  - 54
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23396599
SP  - 622
EP  - 633
ER  - 

TY  - JOUR
AU  - Fionn McLoughlin, Steven A Arisz, Henk L Dekker, Gertjan Kramer, Chris G de Koster, Michel A Haring, Teun Munnik, Christa Testerink
TI  - Identification of novel candidate phosphatidic acid-binding proteins involved in the salt-stress response of Arabidopsis thaliana roots.
JA  - Biochem. J.
PY  - 2013///
VL  - 450
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23323832
SP  - 573
EP  - 581
ER  - 

TY  - JOUR
AU  - Katja Bernfur, Olaf Larsson, Christer Larsson, Niklas Gustavsson
TI  - Relative abundance of integral plasma membrane proteins in Arabidopsis leaf and root tissue determined by metabolic labeling and mass spectrometry.
JA  - PLoS ONE
PY  - 2013///
VL  - 8
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23990937
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Katrin Peters, Katharina Belt, Hans-Peter Braun
TI  - 3D Gel Map of Arabidopsis Complex I.
JA  - Front Plant Sci
PY  - 2013///
VL  - 4
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23761796
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Joaquín Iglesias, Marina Trigueros, Mónica Rojas-Triana, Marisol Fernández, Juan Pablo Albar, Regla Bustos, Javier Paz-Ares, Vicente Rubio
TI  - Proteomics identifies ubiquitin-proteasome targets and new roles for chromatin-remodeling in the Arabidopsis response to phosphate starvation.
JA  - J Proteomics
PY  - 2013///
VL  - 94
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24012629
SP  - 1
EP  - 22
ER  - 

TY  - JOUR
AU  - Takahiro Hamada, Nahoko Nagasaki-Takeuchi, Takehide Kato, Masayuki Fujiwara, Seiji Sonobe, Yoichiro Fukao, Takashi Hashimoto
TI  - Purification and characterization of novel microtubule-associated proteins from Arabidopsis cell suspension cultures.
JA  - Plant Physiol.
PY  - 2013///
VL  - 163
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24134884
SP  - 1804
EP  - 1816
ER  - 

TY  - JOUR
AU  - Atsushi Takabayashi, Ryosuke Kadoya, Masayoshi Kuwano, Katsunori Kurihara, Hisashi Ito, Ryouichi Tanaka, Ayumi Tanaka
TI  - Protein co-migration database (PCoM -DB) for Arabidopsis thylakoids and Synechocystis cells.
JA  - Springerplus
PY  - 2013///
VL  - 2
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23667806
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Sheng Quan, Pingfang Yang, Gaëlle Cassin-Ross, Navneet Kaur, Robert Switzenberg, Kyaw Aung, Jiying Li, Jianping Hu
TI  - Proteome analysis of peroxisomes from etiolated Arabidopsis seedlings identifies a peroxisomal protease involved in β-oxidation and development.
JA  - Plant Physiol.
PY  - 2013///
VL  - 163
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/24130194
SP  - 1518
EP  - 1538
ER  - 

TY  - JOUR
AU  - Katsuhisa Yoshida, Miwa Ohnishi, Yoichiro Fukao, Yozo Okazaki, Masayuki Fujiwara, Chihong Song, Yoichi Nakanishi, Kazuki Saito, Teruo Shimmen, Toshinobu Suzaki, Fumio Hayashi, Hidehiro Fukaki, Masayoshi Maeshima, Tetsuro Mimura
TI  - Studies on vacuolar membrane microdomains isolated from Arabidopsis suspension-cultured cells: local distribution of vacuolar membrane proteins.
JA  - Plant Cell Physiol.
PY  - 2013///
VL  - 54
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23903016
SP  - 1571
EP  - 1584
ER  - 

TY  - JOUR
AU  - Keisuke Yoshida, Ko Noguchi, Ken Motohashi, Toru Hisabori
TI  - Systematic exploration of thioredoxin target proteins in plant mitochondria.
JA  - Plant Cell Physiol.
PY  - 2013///
VL  - 54
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23444301
SP  - 875
EP  - 892
ER  - 

TY  - JOUR
AU  - Elisa Dell'Aglio, Cécile Giustini, Daniel Salvi, Sabine Brugière, Faustine Delpierre, Lucas Moyet, Mathieu Baudet, Daphné Seigneurin-Berny, Michel Matringe, Myriam Ferro, Norbert Rolland, Gilles Curien
TI  - Complementary biochemical approaches applied to the identification of plastidial calmodulin-binding proteins.
JA  - Mol Biosyst
PY  - 2013///
VL  - 9
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23549413
SP  - 1234
EP  - 1248
ER  - 

TY  - JOUR
AU  - Christof Behrens, Christian Blume, Michael Senkler, Holger Eubel, Christoph Peterhänsel, Hans-Peter Braun
TI  - The 'protein complex proteome' of chloroplasts in Arabidopsis thaliana.
JA  - J Proteomics
PY  - 2013///
VL  - 91
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23851315
SP  - 73
EP  - 83
ER  - 

TY  - JOUR
AU  - Stefan Simm, Dimitrios G Papasotiriou, Mohamed Ibrahim, Matthias S Leisegang, Bernd Müller, Tobias Schorge, Michael Karas, Oliver Mirus, Maik S Sommer, Enrico Schleiff
TI  - Defining the core proteome of the chloroplast envelope membranes.
JA  - Front Plant Sci
PY  - 2013///
VL  - 4
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/23390424
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Peter K Lundquist, Anton Poliakov, Nazmul H Bhuiyan, Boris Zybailov, Qi Sun, Klaas J van Wijk
TI  - The functional network of the Arabidopsis plastoglobule proteome based on quantitative proteomics and genome-wide coexpression analysis.
JA  - Plant Physiol.
PY  - 2012///
VL  - 158
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22274653
SP  - 1172
EP  - 1192
ER  - 

TY  - JOUR
AU  - Harriet T Parsons, Katy Christiansen, Bernhard Knierim, Andrew Carroll, Jun Ito, Tanveer S Batth, Andreia M Smith-Moritz, Stephanie Morrison, Peter McInerney, Masood Z Hadi, Manfred Auer, Aindrila Mukhopadhyay, Christopher J Petzold, Henrik V Scheller, Dominique Loqué, Joshua L Heazlewood
TI  - Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis.
JA  - Plant Physiol.
PY  - 2012///
VL  - 159
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22430844
SP  - 12
EP  - 26
ER  - 

TY  - JOUR
AU  - Georgia Drakakaki, Wilhelmina van de Ven, Songqin Pan, Yansong Miao, Junqi Wang, Nana F Keinath, Brent Weatherly, Liwen Jiang, Karin Schumacher, Glenn Hicks, Natasha Raikhel
TI  - Isolation and proteomic analysis of the SYP61 compartment reveal its role in exocytic trafficking in Arabidopsis.
JA  - Cell Res.
PY  - 2012///
VL  - 22
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21826108
SP  - 413
EP  - 424
ER  - 

TY  - JOUR
AU  - Björn Ingelsson, Alexander V Vener
TI  - Phosphoproteomics of Arabidopsis chloroplasts reveals involvement of the STN7 kinase in phosphorylation of nucleoid protein pTAC16.
JA  - FEBS Lett.
PY  - 2012///
VL  - 586
IS  - 9
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22616989
SP  - 1265
EP  - 1271
ER  - 

TY  - JOUR
AU  - Maureen Hummel, Jan H G Cordewener, Joost C M de Groot, Sjef Smeekens, Antoine H P America, Johannes Hanson
TI  - Dynamic protein composition of Arabidopsis thaliana cytosolic ribosomes in response to sucrose feeding as revealed by label free MSE proteomics.
JA  - Proteomics
PY  - 2012///
VL  - 12
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22522809
SP  - 1024
EP  - 1038
ER  - 

TY  - JOUR
AU  - Nino Nikolovski, Denis Rubtsov, Marcelo P Segura, Godfrey P Miles, Tim J Stevens, Tom P J Dunkley, Sean Munro, Kathryn S Lilley, Paul Dupree
TI  - Putative glycosyltransferases and other plant golgi apparatus proteins are revealed by LOPIT proteomics.
JA  - Plant Physiol.
PY  - 2012///
VL  - 160
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22923678
SP  - 1037
EP  - 1051
ER  - 

TY  - JOUR
AU  - Vera Göhre, Alexandra M E Jones, Jan Sklenář, Silke Robatzek, Andreas P M Weber
TI  - Molecular crosstalk between PAMP-triggered immunity and photosynthesis.
JA  - Mol Plant Microbe Interact
PY  - 2012///
VL  - 25
IS  - 8
UR  - None
SP  - 1083
EP  - 1092
ER  - 

TY  - JOUR
AU  - Waltraud X Schulze, Thomas Schneider, Sabrina Starck, Enrico Martinoia, Oliver Trentmann
TI  - Cold acclimation induces changes in Arabidopsis tonoplast protein abundance and activity and alters phosphorylation of tonoplast monosaccharide transporters.
JA  - Plant J
PY  - 2012///
VL  - 69
IS  - 3
UR  - None
SP  - 529
EP  - 541
ER  - 

TY  - JOUR
AU  - Yew-Foon Tan, A Harvey Millar, Nicolas L Taylor
TI  - Components of mitochondrial oxidative phosphorylation vary in abundance following exposure to cold and chemical stresses.
JA  - J Proteome Res
PY  - 2012///
VL  - 11
IS  - 7
UR  - None
SP  - 3860
EP  - 3879
ER  - 

TY  - JOUR
AU  - Chun Pong Lee, Holger Eubel, Cory Solheim, A Harvey Millar
TI  - Mitochondrial proteome heterogeneity between tissues from the vegetative and reproductive stages of Arabidopsis thaliana development.
JA  - J Proteome Res
PY  - 2012///
VL  - 11
IS  - 6
UR  - None
SP  - 3326
EP  - 3343
ER  - 

TY  - JOUR
AU  - Dimitri Heintz, Sebastien Gallien, Vincent Compagnon, Anne Berna, Masashi Suzuki, Shigeo Yoshida, Toshiya Muranaka, Alain Van Dorsselaer, Christine Schaeffer, Thomas J Bach, Hubert Schaller
TI  - Phosphoproteome exploration reveals a reformatting of cellular processes in response to low sterol biosynthetic capacity in Arabidopsis.
JA  - J Proteome Res
PY  - 2012///
VL  - 11
IS  - 2
UR  - None
SP  - 1228
EP  - 1239
ER  - 

TY  - JOUR
AU  - Claude Nespoulous, Valérie Rofidal, Nicolas Sommerer, Sonia Hem, Michel Rossignol
TI  - Phosphoproteomic analysis reveals major default phosphorylation sites outside long intrinsically disordered regions of Arabidopsis plasma membrane proteins.
JA  - Proteome Sci
PY  - 2012///
VL  - 10
IS  - 1
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Saskia Floerl, Andrzej Majcherczyk, Mareike Possienke, Kirstin Feussner, Hella Tappe, Christiane Gatz, Ivo Feussner, Ursula Kües, Andrea Polle
TI  - Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana.
JA  - PLoS One
PY  - 2012///
VL  - 7
IS  - 2
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - María Ángeles Bermúdez, Jeroni Galmés, Inmaculada Moreno, Philip M Mullineaux, Cecilia Gotor, Luis C Romero
TI  - Photosynthetic adaptation to length of day is dependent on S-sulfocysteine synthase activity in the thylakoid lumen.
JA  - Plant Physiol
PY  - 2012///
VL  - 160
IS  - 1
UR  - None
SP  - 274
EP  - 288
ER  - 

TY  - JOUR
AU  - Cory Solheim, Lei Li, Polydefkis Hatzopoulos, A Harvey Millar
TI  - Loss of Lon1 in Arabidopsis changes the mitochondrial proteome leading to altered metabolite profiles and growth retardation without an accumulation of oxidative damage.
JA  - Plant Physiol
PY  - 2012///
VL  - 160
IS  - 3
UR  - None
SP  - 1187
EP  - 1203
ER  - 

TY  - JOUR
AU  - James Mitch Elmore, Jun Liu, Barrett Smith, Brett Phinney, Gitta Coaker
TI  - Quantitative proteomics reveals dynamic changes in the plasma membrane during Arabidopsis immune signaling.
JA  - Mol. Cell Proteomics
PY  - 2012///
VL  - 11
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22215637
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Bin Li, Daisuke Takahashi, Yukio Kawamura, Matsuo Uemura
TI  - Comparison of plasma membrane proteomic changes of arabidopsis suspension-cultured cells (T87 Line) after cold and ABA treatment in association with freezing tolerance development.
JA  - Plant Cell Physiol.
PY  - 2012///
VL  - 53
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/22318864
SP  - 543
EP  - 554
ER  - 

TY  - JOUR
AU  - Jun Ito, Tanveer S Batth, Christopher J Petzold, Alyssa M Redding-Johanson, Aindrila Mukhopadhyay, Robert Verboom, Etienne H Meyer, A Harvey Millar, Joshua L Heazlewood
TI  - Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.
JA  - J. Proteome Res.
PY  - 2011///
VL  - 10
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21166475
SP  - 1571
EP  - 1582
ER  - 

TY  - JOUR
AU  - Yu Zhang, Aurélie Giboulot, Michel Zivy, Benoît Valot, Elisabeth Jamet, Cécile Albenne
TI  - Combining various strategies to increase the coverage of the plant cell wall glycoproteome.
JA  - Phytochemistry
PY  - 2011///
VL  - 72
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21109274
SP  - 1109
EP  - 1123
ER  - 

TY  - JOUR
AU  - Chun Pong Lee, Holger Eubel, Nicholas O'Toole, A Harvey Millar
TI  - Combining proteomics of root and shoot mitochondria and transcript analysis to define constitutive and variable components in plant mitochondria.
JA  - Phytochemistry
PY  - 2011///
VL  - 72
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21296373
SP  - 1092
EP  - 1108
ER  - 

TY  - JOUR
AU  - Jennifer Klodmann, Michael Senkler, Christina Rode, Hans-Peter Braun
TI  - Defining the protein complex proteome of plant mitochondria.
JA  - Plant Physiol.
PY  - 2011///
VL  - 157
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21841088
SP  - 587
EP  - 598
ER  - 

TY  - JOUR
AU  - Irene Granlund, Thomas Kieselbach, Rikard Alm, Wolfgang P Schröder, Cecilia Emanuelsson
TI  - Clustering of MS spectra for improved protein identification rate and screening for protein variants and modifications by MALDI-MS/MS.
JA  - J Proteomics
PY  - 2011///
VL  - 74
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21539947
SP  - 1190
EP  - 1200
ER  - 

TY  - JOUR
AU  - Jean-Marc Monneuse, Madeleine Sugano, Thierry Becue, Véronique Santoni, Sonia Hem, Michel Rossignol
TI  - Towards the profiling of the Arabidopsis thaliana plasma membrane transportome by targeted proteomics.
JA  - Proteomics
PY  - 2011///
VL  - 11
IS  - 9
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21413151
SP  - 1789
EP  - 1797
ER  - 

TY  - JOUR
AU  - Ricky P W Kong, S O Siu, Simon S M Lee, Clive Lo, Ivan K Chu
TI  - Development of online high-/low-pH reversed-phase-reversed-phase two-dimensional liquid chromatography for shotgun proteomics: a reversed-phase-strong cation exchange-reversed-phase approach.
JA  - J Chromatogr A
PY  - 2011///
VL  - 1218
IS  - 23
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21531424
SP  - 3681
EP  - 3688
ER  - 

TY  - JOUR
AU  - Zhe Jenny Zhang, Scott C Peck
TI  - Simplified enrichment of plasma membrane proteins for proteomic analyses in Arabidopsis thaliana.
JA  - Proteomics
PY  - 2011///
VL  - 11
IS  - 9
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21433285
SP  - 1780
EP  - 1788
ER  - 

TY  - JOUR
AU  - Nicolas L Taylor, Joshua L Heazlewood, A Harvey Millar
TI  - The Arabidopsis thaliana 2-D gel mitochondrial proteome: Refining the value of reference maps for assessing protein abundance, contaminants and post-translational modifications.
JA  - Proteomics
PY  - 2011///
VL  - 11
IS  - 9
UR  - http://www.ncbi.nlm.nih.gov/pubmed/21472856
SP  - 1720
EP  - 1733
ER  - 

TY  - JOUR
AU  - Owen Duncan, Nicolas L Taylor, Chris Carrie, Holger Eubel, Szymon Kubiszewski-Jakubiak, Botao Zhang, Reena Narsai, A Harvey Millar, James Whelan
TI  - Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis.
JA  - Plant Physiol.
PY  - 2011///
VL  - 157
IS  - 3
UR  - None
SP  - 1093
EP  - 1113
ER  - 

TY  - JOUR
AU  - Iris Finkemeier, Miriam Laxa, Laurent Miguet, Andrew J M Howden, Lee J Sweetlove
TI  - Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.
JA  - Plant Physiol
PY  - 2011///
VL  - 155
IS  - 4
UR  - None
SP  - 1779
EP  - 1790
ER  - 

TY  - JOUR
AU  - Lourdes Fernandez-Calvino, Christine Faulkner, John Walshaw, Gerhard Saalbach, Emmanuelle Bayer, Yoselin Benitez-Alfonso, Andrew Maule
TI  - Arabidopsis plasmodesmal proteome.
JA  - PLoS One
PY  - 2011///
VL  - 6
IS  - 4
UR  - None
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Paul Dominic B Olinares, Lalit Ponnala, Klaas J van Wijk
TI  - Megadalton complexes in the chloroplast stroma of arabidopsis thaliana characterized by size exclusion chromatography, mass spectrometry, and hierarchical clustering.
JA  - Mol. Cell Proteomics
PY  - 2010///
VL  - 9
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/20423899
SP  - 1594
EP  - 1615
ER  - 

TY  - JOUR
AU  - Rui-Juan Ni, Zhuo Shen, Chuan-Ping Yang, Ya-Dan Wu, Ying-Dong Bi, Bai-Chen Wang
TI  - Identification of low abundance polyA-binding proteins in Arabidopsis chloroplast using polyA-affinity column.
JA  - Mol. Biol. Rep.
PY  - 2010///
VL  - 37
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19288221
SP  - 637
EP  - 641
ER  - 

TY  - JOUR
AU  - Yanmei Chen, Wolfgang Hoehenwarter, Wolfram Weckwerth
TI  - Comparative analysis of phytohormone-responsive phosphoproteins in Arabidopsis thaliana using TiO2-phosphopeptide enrichment and mass accuracy precursor alignment.
JA  - Plant J.
PY  - 2010///
VL  - 63
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/20374526
SP  - 1
EP  - 17
ER  - 

TY  - JOUR
AU  - Myriam Ferro, Sabine Brugière, Daniel Salvi, Daphné Seigneurin-Berny, Magali Court, Lucas Moyet, Claire Ramus, Stéphane Miras, Mourad Mellal, Sophie Le Gall, Sylvie Kieffer-Jaquinod, Christophe Bruley, Jérôme Garin, Jacques Joyard, Christophe Masselon, Norbert Rolland
TI  - AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins.
JA  - Mol. Cell Proteomics
PY  - 2010///
VL  - 9
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/20061580
SP  - 1063
EP  - 1084
ER  - 

TY  - JOUR
AU  - Michael Hall, Alejandro Mata-Cabana, Hans-Erik Akerlund, Francisco J Florencio, Wolfgang P Schröder, Marika Lindahl, Thomas Kieselbach
TI  - Thioredoxin targets of the plant chloroplast lumen and their implications for plastid function.
JA  - Proteomics
PY  - 2010///
VL  - 10
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/20049866
SP  - 987
EP  - 1001
ER  - 

TY  - JOUR
AU  - Jennifer Klodmann, Stephanie Sunderhaus, Manfred Nimtz, Lothar Jänsch, Hans-Peter Braun
TI  - Internal architecture of mitochondrial complex I from Arabidopsis thaliana.
JA  - Plant Cell
PY  - 2010///
VL  - 22
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/20197505
SP  - 797
EP  - 810
ER  - 

TY  - JOUR
AU  - Nana F Keinath, Sylwia Kierszniowska, Justine Lorek, Gildas Bourdais, Sharon A Kessler, Hiroko Shimosato-Asano, Ueli Grossniklaus, Waltraud X Schulze, Silke Robatzek, Ralph Panstruga
TI  - PAMP (pathogen-associated molecular pattern)-induced changes in plasma membrane compartmentalization reveal novel components of plant immunity.
JA  - J. Biol. Chem.
PY  - 2010///
VL  - 285
IS  - 50
UR  - http://www.ncbi.nlm.nih.gov/pubmed/20843791
SP  - 39140
EP  - 39149
ER  - 

TY  - JOUR
AU  - Sigrun Reumann, Sheng Quan, Kyaw Aung, Pingfang Yang, Kalpana Manandhar-Shrestha, Danielle Holbrook, Nicole Linka, Robert Switzenberg, Curtis G Wilkerson, Andreas P M Weber, Laura J Olsen, Jianping Hu
TI  - In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes.
JA  - Plant Physiol.
PY  - 2009///
VL  - 150
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19329564
SP  - 125
EP  - 143
ER  - 

TY  - JOUR
AU  - Srijeet K Mitra, Benjamin T Walters, Steven D Clouse, Michael B Goshe
TI  - An efficient organic solvent based extraction method for the proteomic analysis of Arabidopsis plasma membranes.
JA  - J. Proteome Res.
PY  - 2009///
VL  - 8
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19334764
SP  - 2752
EP  - 2767
ER  - 

TY  - JOUR
AU  - Yiping Qi, Fumiaki Katagiri
TI  - Purification of low-abundance Arabidopsis plasma-membrane protein complexes and identification of candidate components.
JA  - Plant J.
PY  - 2009///
VL  - 57
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19000159
SP  - 932
EP  - 944
ER  - 

TY  - JOUR
AU  - Fang-yi Cheng, Kevin Blackburn, Yu-min Lin, Micheal B Goshe, John D Williamson
TI  - Absolute protein quantification by LC/MS(E) for global analysis of salicylic acid-induced plant protein secretion responses.
JA  - J. Proteome Res.
PY  - 2009///
VL  - 8
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18998720
SP  - 82
EP  - 93
ER  - 

TY  - JOUR
AU  - Jun Ito, Nicolas L Taylor, Ian Castleden, Wolfram Weckwerth, A Harvey Millar, Joshua L Heazlewood
TI  - A survey of the Arabidopsis thaliana mitochondrial phosphoproteome.
JA  - Proteomics
PY  - 2009///
VL  - 9
IS  - 17
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19688752
SP  - 4229
EP  - 4240
ER  - 

TY  - JOUR
AU  - Pengxiang Fan, Xuchu Wang, Tingyun Kuang, Yinxin Li
TI  - An efficient method for the extraction of chloroplast proteins compatible for 2-DE and MS analysis.
JA  - Electrophoresis
PY  - 2009///
VL  - 30
IS  - 17
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19676087
SP  - 3024
EP  - 3033
ER  - 

TY  - JOUR
AU  - Cécile Albenne, Hervé Canut, Georges Boudart, Yu Zhang, Hélène San Clemente, Rafael Pont-Lezica, Elisabeth Jamet
TI  - Plant cell wall proteomics: mass spectrometry data, a trove for research on protein structure/function relationships.
JA  - Mol Plant
PY  - 2009///
VL  - 2
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/19825673
SP  - 977
EP  - 989
ER  - 

TY  - JOUR
AU  - Chun Pong Lee, Holger Eubel, Nicholas O'Toole, A Harvey Millar
TI  - Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism.
JA  - Mol. Cell Proteomics
PY  - 2008///
VL  - 7
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18385124
SP  - 1297
EP  - 1316
ER  - 

TY  - JOUR
AU  - Boris Zybailov, Heidi Rutschow, Giulia Friso, Andrea Rudella, Olof Emanuelsson, Qi Sun, Klaas J van Wijk
TI  - Sorting signals, N-terminal modifications and abundance of the chloroplast proteome
JA  - PLoS ONE
PY  - 2008///
VL  - 3
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18431481
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Elke Ströher, Karl-Josef Dietz
TI  - The dynamic thiol-disulphide redox proteome of the Arabidopsis thaliana chloroplast as revealed by differential electrophoretic mobility.
JA  - Physiol Plant
PY  - 2008///
VL  - 133
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18433418
SP  - 566
EP  - 583
ER  - 

TY  - JOUR
AU  - Heidi Rutschow, A Jimmy Ytterberg, Giulia Friso, Robert Nilsson, Klaas J van Wijk
TI  - Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.
JA  - Plant Physiol.
PY  - 2008///
VL  - 148
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18633119
SP  - 156
EP  - 175
ER  - 

TY  - JOUR
AU  - Sally-Anne Whiteman, Liliya Serazetdinova, Alexandra M E Jones, Dale Sanders, John Rathjen, Scott C Peck, Frans J M Maathuis
TI  - Identification of novel proteins and phosphorylation sites in a tonoplast enriched membrane fraction of Arabidopsis thaliana.
JA  - Proteomics
PY  - 2008///
VL  - 8
IS  - 17
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18686298
SP  - 3536
EP  - 3547
ER  - 

TY  - JOUR
AU  - Holger Eubel, Etienne H Meyer, Nicolas L Taylor, John D Bussell, Nicholas O'Toole, Joshua L Heazlewood, Ian Castleden, Ian D Small, Steven M Smith, A Harvey Millar
TI  - Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes.
JA  - Plant Physiol.
PY  - 2008///
VL  - 148
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18931141
SP  - 1809
EP  - 1829
ER  - 

TY  - JOUR
AU  - Adam J Carroll, Joshua L Heazlewood, Jun Ito, A Harvey Millar
TI  - Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification.
JA  - Mol. Cell Proteomics
PY  - 2008///
VL  - 7
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17934214
SP  - 347
EP  - 369
ER  - 

TY  - JOUR
AU  - Etienne H Meyer, Nicolas L Taylor, A Harvey Millar
TI  - Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis.
JA  - J. Proteome Res.
PY  - 2008///
VL  - 7
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18189341
SP  - 786
EP  - 794
ER  - 

TY  - JOUR
AU  - Sergio de la Fuente van Bentem, Dorothea Anrather, Ilse Dohnal, Elisabeth Roitinger, Edina Csaszar, Jos Joore, Joshua Buijnink, Alessandro Carreri, Celine Forzani, Zdravko J Lorkovic, Andrea Barta, David Lecourieux, Andreas Verhounig, Claudia Jonak, Heribert Hirt
TI  - Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.
JA  - J. Proteome Res.
PY  - 2008///
VL  - 7
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/18433157
SP  - 2458
EP  - 2470
ER  - 

TY  - JOUR
AU  - Michel Jaquinod, Florent Villiers, Sylvie Kieffer-Jaquinod, Véronique Hugouvieux, Christophe Bruley, Jérôme Garin, Jacques Bourguignon
TI  - A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture
JA  - Mol Cell Proteomics
PY  - 2007///
VL  - 6
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17151019
SP  - 394
EP  - 412
ER  - 

TY  - JOUR
AU  - Joris J Benschop, Shabaz Mohammed, Martina O'Flaherty, Albert J R Heck, Monique Slijper, Frank L H Menke
TI  - Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis
JA  - Mol Cell Proteomics
PY  - 2007///
VL  - 6
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17317660
SP  - 1198
EP  - 1214
ER  - 

TY  - JOUR
AU  - Etienne H Meyer, Joshua L Heazlewood, A Harvey Millar
TI  - Mitochondrial acyl carrier proteins in Arabidopsis thaliana are predominantly soluble matrix proteins and none can be confirmed as subunits of respiratory Complex I
JA  - Plant Mol Biol
PY  - 2007///
VL  - 64
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17406791
SP  - 319
EP  - 327
ER  - 

TY  - JOUR
AU  - Anne Marmagne, Myriam Ferro, Thierry Meinnel, Christophe Bruley, Lauriane Kuhn, Jérome Garin, Hélène Barbier-Brygoo, Geneviève Ephritikhine
TI  - A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome
JA  - Mol Cell Proteomics
PY  - 2007///
VL  - 6
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17644812
SP  - 1980
EP  - 1996
ER  - 

TY  - JOUR
AU  - Sonia Hem, Valérie Rofidal, Nicolas Sommerer, Michel Rossignol
TI  - Novel subsets of the Arabidopsis plasmalemma phosphoproteome identify phosphorylation sites in secondary active transporters
JA  - Biochem Biophys Res Commun
PY  - 2007///
VL  - 363
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17869214
SP  - 375
EP  - 380
ER  - 

TY  - JOUR
AU  - Sigrun Reumann, Lavanya Babujee, Changle Ma, Stephanie Wienkoop, Tanja Siemsen, Gerardo E Antonicelli, Nicolas Rasche, Franziska Lüder, Wolfram Weckwerth, Olaf Jahn
TI  - Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms
JA  - Plant Cell
PY  - 2007///
VL  - 19
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17951448
SP  - 3170
EP  - 3193
ER  - 

TY  - JOUR
AU  - Jean-Benoit Peltier, Yang Cai, Qi Sun, Vladimir Zabrouskov, Lisa Giacomelli, Andrea Rudella, A Jimmy Ytterberg, Heidi Rutschow, Klaas J van Wijk
TI  - The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts
JA  - Mol Cell Proteomics
PY  - 2006///
VL  - 5
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16207701
SP  - 114
EP  - 133
ER  - 

TY  - JOUR
AU  - Emmanuelle M Bayer, Andrew R Bottrill, John Walshaw, Marielle Vigouroux, Mike J Naldrett, Carole L Thomas, Andrew J Maule
TI  - Arabidopsis cell wall proteome defined using multidimensional protein identification technology
JA  - Proteomics
PY  - 2006///
VL  - 6
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16287169
SP  - 301
EP  - 311
ER  - 

TY  - JOUR
AU  - Elisabeth Jamet, Hervé Canut, Georges Boudart, Rafael F Pont-Lezica
TI  - Cell wall proteins: a new insight through proteomics
JA  - Trends Plant Sci
PY  - 2006///
VL  - 11
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16356755
SP  - 33
EP  - 39
ER  - 

TY  - JOUR
AU  - Pierre-Alexandre Vidi, Marion Kanwischer, Sacha Baginsky, Jotham R Austin, Gabor Csucs, Peter Dörmann, Felix Kessler, Claire Bréhélin
TI  - Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles
JA  - J Biol Chem
PY  - 2006///
VL  - 281
IS  - 16
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16414959
SP  - 11225
EP  - 11234
ER  - 

TY  - JOUR
AU  - A Jimmy Ytterberg, Jean-Benoit Peltier, Klaas J van Wijk
TI  - Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes
JA  - Plant Physiol
PY  - 2006///
VL  - 140
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16461379
SP  - 984
EP  - 997
ER  - 

TY  - JOUR
AU  - Rumyana Karlova, Sjef Boeren, Eugenia Russinova, José Aker, Jacques Vervoort, Sacco de Vries
TI  - The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE1 protein complex includes BRASSINOSTEROID-INSENSITIVE1
JA  - Plant Cell
PY  - 2006///
VL  - 18
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16473966
SP  - 626
EP  - 638
ER  - 

TY  - JOUR
AU  - Felix Elortza, Shabaz Mohammed, Jakob Bunkenborg, Leonard J Foster, Thomas S Nühse, Urs Brodbeck, Scott C Peck, Ole N Jensen
TI  - Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment
JA  - J Proteome Res
PY  - 2006///
VL  - 5
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16602701
SP  - 935
EP  - 943
ER  - 

TY  - JOUR
AU  - Tom P J Dunkley, Svenja Hester, Ian P Shadforth, John Runions, Thilo Weimar, Sally L Hanton, Julian L Griffin, Conrad Bessant, Federica Brandizzi, Chris Hawes, Rod B Watson, Paul Dupree, Kathryn S Lilley
TI  - Mapping the Arabidopsis organelle proteome
JA  - Proc Natl Acad Sci U S A
PY  - 2006///
VL  - 103
IS  - 17
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16618929
SP  - 6518
EP  - 6523
ER  - 

TY  - JOUR
AU  - Clark J Nelson, Adrian D Hegeman, Amy C Harms, Michael R Sussman
TI  - A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling
JA  - Mol Cell Proteomics
PY  - 2006///
VL  - 5
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16635983
SP  - 1382
EP  - 1395
ER  - 

TY  - JOUR
AU  - Lisa Giacomelli, Andrea Rudella, Klaas Jan van Wijk
TI  - High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study
JA  - Plant Physiol
PY  - 2006///
VL  - 141
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16648217
SP  - 685
EP  - 701
ER  - 

TY  - JOUR
AU  - Leila Feiz, Muhammad Irshad, Rafael F Pont-Lezica, Hervé Canut, Elisabeth Jamet
TI  - Evaluation of cell wall preparations for proteomics: a new procedure for purifying cell walls from Arabidopsis hypocotyls.
JA  - Plant Methods
PY  - 2006///
VL  - 2
IS  - 
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16729891
SP  - 
EP  - 
ER  - 

TY  - JOUR
AU  - Estelle Goulas, Maria Schubert, Thomas Kieselbach, Leszek A Kleczkowski, Per Gardeström, Wolfgang Schröder, Vaughan Hurry
TI  - The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short- and long-term exposure to low temperature
JA  - Plant J
PY  - 2006///
VL  - 47
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/16923014
SP  - 720
EP  - 734
ER  - 

TY  - JOUR
AU  - Jun Ito, Joshua L Heazlewood, A Harvey Millar
TI  - Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphate interactions within the matrix
JA  - J Proteome Res
PY  - 2006///
VL  - 5
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/pubmed/17137349
SP  - 3459
EP  - 3469
ER  - 

TY  - JOUR
AU  - Ing-Feng Chang, Kathleen Szick-Miranda, Songqin Pan, Julia Bailey-Serres
TI  - Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes.
JA  - Plant Physiol.
PY  - 2005///
VL  - 137
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15734919
SP  - 848
EP  - 862
ER  - 

TY  - JOUR
AU  - Alison F Pendle, Gillian P Clark, Reinier Boon, Dominika Lewandowska, Yun Wah Lam, Jens Andersen, Matthias Mann, Angus I Lamond, John W S Brown, Peter J Shaw
TI  - Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions
JA  - Mol Biol Cell
PY  - 2005///
VL  - 16
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15496452
SP  - 260
EP  - 269
ER  - 

TY  - JOUR
AU  - Georges Boudart, Elisabeth Jamet, Michel Rossignol, Claude Lafitte, Gisèle Borderies, Alain Jauneau, Marie-Thérèse Esquerré-Tugayé, Rafael Pont-Lezica
TI  - Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics
JA  - Proteomics
PY  - 2005///
VL  - 5
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15593128
SP  - 212
EP  - 221
ER  - 

TY  - JOUR
AU  - Stéphane Charmont, Elisabeth Jamet, Rafael Pont-Lezica, Hervé Canut
TI  - Proteomic analysis of secreted proteins from Arabidopsis thaliana seedlings: improved recovery following removal of phenolic compounds
JA  - Phytochemistry
PY  - 2005///
VL  - 66
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15694452
SP  - 453
EP  - 461
ER  - 

TY  - JOUR
AU  - Patrick Giavalisco, Daniel Wilson, Thomas Kreitler, Hans Lehrach, Joachim Klose, Johan Gobom, Paola Fucini
TI  - High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome
JA  - Plant Mol Biol
PY  - 2005///
VL  - 57
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15821981
SP  - 577
EP  - 591
ER  - 

TY  - JOUR
AU  - Joshua L Heazlewood, Julian S Tonti-Filippini, Alexander M Gout, David A Day, James Whelan, A Harvey Millar
TI  - Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins
JA  - Plant Cell
PY  - 2004///
VL  - 16
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14671022
SP  - 241
EP  - 256
ER  - 

TY  - JOUR
AU  - Giulia Friso, Lisa Giacomelli, A Jimmy Ytterberg, Jean-Benoit Peltier, Andrea Rudella, Qi Sun, Klaas J van Wijk
TI  - In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database
JA  - Plant Cell
PY  - 2004///
VL  - 16
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14729914
SP  - 478
EP  - 499
ER  - 

TY  - JOUR
AU  - Ryan Lister, Orinda Chew, May-Nee Lee, Joshua L Heazlewood, Rachel Clifton, Karen L Parker, A Harvey Millar, James Whelan
TI  - A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction
JA  - Plant Physiol
PY  - 2004///
VL  - 134
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14730085
SP  - 777
EP  - 789
ER  - 

TY  - JOUR
AU  - Orinda Chew, Ryan Lister, Soumya Qbadou, Joshua L Heazlewood, Jurgen Soll, Enrico Schleiff, A Harvey Millar, James Whelan
TI  - A plant outer mitochondrial membrane protein with high amino acid sequence identity to a chloroplast protein import receptor.
JA  - FEBS Lett
PY  - 2004///
VL  - 557
IS  - 1-3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14741350
SP  - 109
EP  - 114
ER  - 

TY  - JOUR
AU  - Wojciech Szponarski, Nicolas Sommerer, Jean-Christophe Boyer, Michel Rossignol, Rémy Gibrat
TI  - Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography
JA  - Proteomics
PY  - 2004///
VL  - 4
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14760709
SP  - 397
EP  - 406
ER  - 

TY  - JOUR
AU  - Nicolas L Taylor, Joshua L Heazlewood, David A Day, A Harvey Millar
TI  - Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis
JA  - Plant Physiol
PY  - 2004///
VL  - 134
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14764908
SP  - 838
EP  - 848
ER  - 

TY  - JOUR
AU  - Torsten Kleffmann, Doris Russenberger, Anne von Zychlinski, Wayne Christopher, Kimmen Sjölander, Wilhelm Gruissem, Sacha Baginsky
TI  - The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions
JA  - Curr Biol
PY  - 2004///
VL  - 14
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15028209
SP  - 354
EP  - 362
ER  - 

TY  - JOUR
AU  - Anne Marmagne, Marie-Aude Rouet, Myriam Ferro, Norbert Rolland, Carine Alcon, Jacques Joyard, Jérome Garin, Hélène Barbier-Brygoo, Geneviève Ephritikhine
TI  - Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome
JA  - Mol Cell Proteomics
PY  - 2004///
VL  - 3
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15060130
SP  - 675
EP  - 691
ER  - 

TY  - JOUR
AU  - A R Slabas, B Ndimba, W J Simon, S Chivasa
TI  - Proteomic analysis of the Arabidopsis cell wall reveals unexpected proteins with new cellular locations.
JA  - Biochem. Soc. Trans.
PY  - 2004///
VL  - 32
IS  - Pt3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15157177
SP  - 524
EP  - 528
ER  - 

TY  - JOUR
AU  - Taise Shimaoka, Miwa Ohnishi, Takashi Sazuka, Naoto Mitsuhashi, Ikuko Hara-Nishimura, Ken-Ichiro Shimazaki, Masayoshi Maeshima, Akiho Yokota, Ken-Ichi Tomizawa, Tetsuro Mimura
TI  - Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana.
JA  - Plant Cell Physiol
PY  - 2004///
VL  - 45
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15215502
SP  - 672
EP  - 683
ER  - 

TY  - JOUR
AU  - Sabine Brugière, Solène Kowalski, Myriam Ferro, Daphné Seigneurin-Berny, Stéphane Miras, Daniel Salvi, Stéphane Ravanel, Pierre d'Hérin, Jérôme Garin, Jacques Bourguignon, Jacques Joyard, Norbert Rolland
TI  - The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions
JA  - Phytochemistry
PY  - 2004///
VL  - 65
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15276431
SP  - 1693
EP  - 1707
ER  - 

TY  - JOUR
AU  - Thomas S Nühse, Allan Stensballe, Ole N Jensen, Scott C Peck
TI  - Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database
JA  - Plant Cell
PY  - 2004///
VL  - 16
IS  - 9
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15308754
SP  - 2394
EP  - 2405
ER  - 

TY  - JOUR
AU  - Jean-Benoit Peltier, A Jimmy Ytterberg, Qi Sun, Klaas J van Wijk
TI  - New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy
JA  - J Biol Chem
PY  - 2004///
VL  - 279
IS  - 47
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15322131
SP  - 49367
EP  - 49383
ER  - 

TY  - JOUR
AU  - Clay Carter, Songqin Pan, Jan Zouhar, Emily L Avila, Thomas Girke, Natasha V Raikhel
TI  - The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins
JA  - Plant Cell
PY  - 2004///
VL  - 16
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15539469
SP  - 3285
EP  - 3303
ER  - 

TY  - JOUR
AU  - Erik Alexandersson, Gerhard Saalbach, Christer Larsson, Per Kjellbom
TI  - Arabidopsis plasma membrane proteomics identifies components of transport, signal transduction and membrane trafficking
JA  - Plant Cell Physiol
PY  - 2004///
VL  - 45
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15574830
SP  - 1543
EP  - 1556
ER  - 

TY  - JOUR
AU  - A Harvey Millar, Holger Eubel, Lothar Jänsch, Volker Kruft, Joshua L Heazlewood, Hans-Peter Braun
TI  - Mitochondrial cytochrome c oxidase and succinate dehydrogenase complexes contain plant specific subunits
JA  - Plant Mol Biol
PY  - 2004///
VL  - 56
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15604729
SP  - 77
EP  - 90
ER  - 

TY  - JOUR
AU  - T P J Dunkley, R Watson, J L Griffin, P Dupree, K S Lilley
TI  - Localization of organelle proteins by isotope tagging (LOPIT).
JA  - Mol. Cell Proteomics
PY  - 2004///
VL  - 3
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/pubmed/15295017
SP  - 1128
EP  - 1134
ER  - 

TY  - JOUR
AU  - Sosuke Iwai, Atsushi Ishiji, Issei Mabuchi, Kazuo Sutoh
TI  - A novel actin-bundling kinesin-related protein from Dictyostelium discoideum.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623897
SP  - 4696
EP  - 4704
ER  - 

TY  - JOUR
AU  - Juan J Sironi, Toru Ouchi
TI  - STAT1-induced apoptosis is mediated by caspases 2, 3, and 7.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623896
SP  - 4066
EP  - 4074
ER  - 

TY  - JOUR
AU  - Véronique Neaud, Jennifer Gillibert Duplantier, Claire Mazzocco, Walter Kisiel, Jean Rosenbaum
TI  - Thrombin up-regulates tissue factor pathway inhibitor-2 synthesis through a cyclooxygenase-2-dependent, epidermal growth factor receptor-independent mechanism.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623891
SP  - 5200
EP  - 5206
ER  - 

TY  - JOUR
AU  - Ivan Orlandi, Maurizio Bettiga, Lilia Alberghina, Marina Vai
TI  - Transcriptional profiling of ubp10 null mutant reveals altered subtelomeric gene expression and insurgence of oxidative stress response.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623890
SP  - 6414
EP  - 6425
ER  - 

TY  - JOUR
AU  - Eugenia Costamagna, Bibian García, Pilar Santisteban
TI  - The functional interaction between the paired domain transcription factor Pax8 and Smad3 is involved in transforming growth factor-beta repression of the sodium/iodide symporter gene.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623893
SP  - 3439
EP  - 3446
ER  - 

TY  - JOUR
AU  - Simon J Atkinson, Melanie A Hosford, Bruce A Molitoris
TI  - Mechanism of actin polymerization in cellular ATP depletion.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623892
SP  - 5194
EP  - 5199
ER  - 

TY  - JOUR
AU  - Toshiyuki Murai, Yoshihiro Miyazaki, Hitomi Nishinakamura, Kazuki N Sugahara, Takayuki Miyauchi, Yasushi Sako, Toshio Yanagida, Masayuki Miyasaka
TI  - Engagement of CD44 promotes Rac activation and CD44 cleavage during tumor cell migration.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623895
SP  - 4541
EP  - 4550
ER  - 

TY  - JOUR
AU  - Vi Pham, John D Wade, Brooke W Purdue, Patrick M Sexton
TI  - Spatial proximity between a photolabile residue in position 19 of salmon calcitonin and the amino terminus of the human calcitonin receptor.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623894
SP  - 6720
EP  - 6729
ER  - 

TY  - JOUR
AU  - Fausto Andreola, Graham P Hayhurst, Gang Luo, Stephen S Ferguson, Frank J Gonzalez, Joyce A Goldstein, Luigi M De Luca
TI  - Mouse liver CYP2C39 is a novel retinoic acid 4-hydroxylase. Its down-regulation offers a molecular basis for liver retinoid accumulation and fibrosis in aryl hydrocarbon receptor-null mice.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623888
SP  - 3434
EP  - 3438
ER  - 

TY  - JOUR
AU  - Soochong Kim, Jianguo Jin, Satya P Kunapuli
TI  - Akt activation in platelets depends on Gi signaling pathways.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623889
SP  - 4186
EP  - 4195
ER  - 

TY  - JOUR
AU  - Om P Srivastava, Marion C Kirk, Kiran Srivastava
TI  - Characterization of covalent multimers of crystallins in aging human lenses.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623886
SP  - 10901
EP  - 10909
ER  - 

TY  - JOUR
AU  - Catarina Sacristán, María Isabel Tussié-Luna, Sheila M Logan, Ananda L Roy
TI  - Mechanism of Bruton's tyrosine kinase-mediated recruitment and regulation of TFII-I.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623887
SP  - 7147
EP  - 7158
ER  - 

TY  - JOUR
AU  - Peizhen Yang, Hongyong Fu, Joseph Walker, Charles M Papa, Jan Smalle, Yu-Ming Ju, Richard D Vierstra
TI  - Purification of the Arabidopsis 26 S proteasome: biochemical and molecular analyses revealed the presence of multiple isoforms.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623884
SP  - 6401
EP  - 6413
ER  - 

TY  - JOUR
AU  - Douglas E Albrecht, Stanley C Froehner
TI  - DAMAGE, a novel alpha-dystrobrevin-associated MAGE protein in dystrophin complexes.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 8
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623885
SP  - 7014
EP  - 7023
ER  - 

TY  - JOUR
AU  - Jodel Giraud, Rebecca Leshan, Yong-Hee Lee, Morris F White
TI  - Nutrient-dependent and insulin-stimulated phosphorylation of insulin receptor substrate-1 on serine 302 correlates with increased insulin signaling.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623899
SP  - 3447
EP  - 3454
ER  - 

TY  - JOUR
AU  - Sunghoon Kim, Claire Domon-Dell, Junghee Kang, Dai H Chung, Jean-Noel Freund, B Mark Evers
TI  - Down-regulation of the tumor suppressor PTEN by the tumor necrosis factor-alpha/nuclear factor-kappaB (NF-kappaB)-inducing kinase/NF-kappaB pathway is linked to a default IkappaB-alpha autoregulatory loop.
JA  - J. Biol. Chem.
PY  - 2004///
VL  - 279
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623898
SP  - 4285
EP  - 4291
ER  - 

TY  - JOUR
AU  - Andrea A Ludwig, Tina Romeis, Jonathan D G Jones
TI  - CDPK-mediated signalling pathways: specificity and cross-talk.
JA  - J. Exp. Bot.
PY  - 2004///
VL  - 55
IS  - 395
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623901
SP  - 181
EP  - 188
ER  - 

TY  - JOUR
AU  - Rainer Saedler, Ian T Baldwin
TI  - Virus-induced gene silencing of jasmonate-induced direct defences, nicotine and trypsin proteinase-inhibitors in Nicotiana attenuata.
JA  - J. Exp. Bot.
PY  - 2004///
VL  - 55
IS  - 395
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14623900
SP  - 151
EP  - 157
ER  - 

TY  - JOUR
AU  - A Harvey Millar, Joshua L Heazlewood
TI  - Genomic and proteomic analysis of mitochondrial carrier proteins in Arabidopsis
JA  - Plant Physiol
PY  - 2003///
VL  - 131
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12586869
SP  - 443
EP  - 453
ER  - 

TY  - JOUR
AU  - V L Herald, J L Heazlewood, D A Day, A H Millar
TI  - Proteomic identification of divalent metal cation binding proteins in plant mitochondria.
JA  - FEBS Lett
PY  - 2003///
VL  - 537
IS  - 1-3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12606038
SP  - 96
EP  - 100
ER  - 

TY  - JOUR
AU  - Véronique Santoni, Joëlle Vinh, Delphine Pflieger, Nicolas Sommerer, Christophe Maurel
TI  - A proteomic study reveals novel insights into the diversity of aquaporin forms expressed in the plasma membrane of plant roots
JA  - Biochem J
PY  - 2003///
VL  - 373
IS  - Pt 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12678916
SP  - 289
EP  - 296
ER  - 

TY  - JOUR
AU  - J L Heazlewood, J Whelan, A H Millar
TI  - The products of the mitochondrial orf25 and orfB genes are FO components in the plant F1FO ATP synthase.
JA  - FEBS Lett
PY  - 2003///
VL  - 540
IS  - 1-3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12681508
SP  - 201
EP  - 205
ER  - 

TY  - JOUR
AU  - Myriam Ferro, Daniel Salvi, Sabine Brugière, Stéphane Miras, Solène Kowalski, Mathilde Louwagie, Jérôme Garin, Jacques Joyard, Norbert Rolland
TI  - Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana
JA  - Mol Cell Proteomics
PY  - 2003///
VL  - 2
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12766230
SP  - 325
EP  - 345
ER  - 

TY  - JOUR
AU  - Georg H H Borner, Kathryn S Lilley, Timothy J Stevens, Paul Dupree
TI  - Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis
JA  - Plant Physiol
PY  - 2003///
VL  - 132
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12805588
SP  - 568
EP  - 577
ER  - 

TY  - JOUR
AU  - Joshua L Heazlewood, Katharine A Howell, A Harvey Millar
TI  - Mitochondrial complex I from Arabidopsis and rice: orthologs of mammalian and fungal components coupled with plant-specific subunits.
JA  - Biochim Biophys Acta
PY  - 2003///
VL  - 1604
IS  - 3
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12837548
SP  - 159
EP  - 169
ER  - 

TY  - JOUR
AU  - John E Froehlich, Curtis G Wilkerson, W Keith Ray, Rosemary S McAndrew, Katherine W Osteryoung, Douglas A Gage, Brett S Phinney
TI  - Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis.
JA  - J Proteome Res
PY  - 2003///
VL  - 2
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12938931
SP  - 413
EP  - 425
ER  - 

TY  - JOUR
AU  - Orinda Chew, James Whelan, A Harvey Millar
TI  - Molecular definition of the ascorbate-glutathione cycle in Arabidopsis mitochondria reveals dual targeting of antioxidant defenses in plants
JA  - J Biol Chem
PY  - 2003///
VL  - 278
IS  - 47
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12954611
SP  - 46869
EP  - 46877
ER  - 

TY  - JOUR
AU  - Holger Eubel, Lothar Jänsch, Hans-Peter Braun
TI  - New insights into the respiratory chain of plant mitochondria. Supercomplexes and a unique composition of complex II.
JA  - Plant Physiol
PY  - 2003///
VL  - 133
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12970493
SP  - 274
EP  - 286
ER  - 

TY  - JOUR
AU  - Tomasz T Calikowski, Tea Meulia, Iris Meier
TI  - A proteomic study of the arabidopsis nuclear matrix
JA  - J Cell Biochem
PY  - 2003///
VL  - 90
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14505352
SP  - 361
EP  - 378
ER  - 

TY  - JOUR
AU  - Thomas S Nühse, Allan Stensballe, Ole N Jensen, Scott C Peck
TI  - Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry
JA  - Mol Cell Proteomics
PY  - 2003///
VL  - 2
IS  - 11
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14506206
SP  - 1234
EP  - 1243
ER  - 

TY  - JOUR
AU  - Felix Elortza, Thomas S Nühse, Leonard J Foster, Allan Stensballe, Scott C Peck, Ole N Jensen
TI  - Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins
JA  - Mol Cell Proteomics
PY  - 2003///
VL  - 2
IS  - 12
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14517339
SP  - 1261
EP  - 1270
ER  - 

TY  - JOUR
AU  - Yoichiro Fukao, Makoto Hayashi, Ikuko Hara-Nishimura, Mikio Nishimura
TI  - Novel glyoxysomal protein kinase, GPK1, identified by proteomic analysis of glyoxysomes in etiolated cotyledons of Arabidopsis thaliana.
JA  - Plant Cell Physiol
PY  - 2003///
VL  - 44
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14581625
SP  - 1002
EP  - 1012
ER  - 

TY  - JOUR
AU  - Gisèle Borderies, Elisabeth Jamet, Claude Lafitte, Michel Rossignol, Alain Jauneau, Georges Boudart, Bernard Monsarrat, Marie-Thérèse Esquerré-Tugayé, Alain Boudet, Rafael Pont-Lezica
TI  - Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis
JA  - Electrophoresis
PY  - 2003///
VL  - 24
IS  - 19-20
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14595688
SP  - 3421
EP  - 3432
ER  - 

TY  - JOUR
AU  - Min Seok Bae, Eun Ju Cho, Eun-Young Choi, Ohkmae K Park
TI  - Analysis of the Arabidopsis nuclear proteome and its response to cold stress.
JA  - Plant J
PY  - 2003///
VL  - 36
IS  - 5
UR  - http://www.ncbi.nlm.nih.gov/pubmed/14617066
SP  - 652
EP  - 663
ER  - 

TY  - JOUR
AU  - Maria Schubert, Ulrika A Petersson, Brian J Haas, Christiane Funk, Wolfgang P Schröder, Thomas Kieselbach
TI  - Proteome map of the chloroplast lumen of Arabidopsis thaliana
JA  - J Biol Chem
PY  - 2002///
VL  - 277
IS  - 10
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11719511
SP  - 8354
EP  - 8365
ER  - 

TY  - JOUR
AU  - Jean-Benoît Peltier, Olof Emanuelsson, Dário E Kalume, Jimmy Ytterberg, Giulia Friso, Andrea Rudella, David A Liberles, Linda Söderberg, Peter Roepstorff, Gunnar von Heijne, Klaas J van Wijk
TI  - Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.
JA  - Plant Cell
PY  - 2002///
VL  - 14
IS  - 1
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11826309
SP  - 211
EP  - 236
ER  - 

TY  - JOUR
AU  - Wolf Werhahn, Hans-Peter Braun
TI  - Biochemical dissection of the mitochondrial proteome from Arabidopsis thaliana by three-dimensional gel electrophoresis
JA  - Electrophoresis
PY  - 2002///
VL  - 23
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11870776
SP  - 640
EP  - 646
ER  - 

TY  - JOUR
AU  - Youichiro Fukao, Makoto Hayashi, Mikio Nishimura
TI  - Proteomic analysis of leaf peroxisomal proteins in greening cotyledons of Arabidopsis thaliana.
JA  - Plant Cell Physiol
PY  - 2002///
VL  - 43
IS  - 7
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12154131
SP  - 689
EP  - 696
ER  - 

TY  - JOUR
AU  - L J Sweetlove, J L Heazlewood, V Herald, R Holtzapffel, D A Day, C J Leaver, A H Millar
TI  - The impact of oxidative stress on Arabidopsis mitochondria.
JA  - Plant J
PY  - 2002///
VL  - 32
IS  - 6
UR  - http://www.ncbi.nlm.nih.gov/pubmed/12492832
SP  - 891
EP  - 904
ER  - 

TY  - JOUR
AU  - W Werhahn, A Niemeyer, L Jänsch, V Kruft, U K Schmitz, H Braun
TI  - Purification and characterization of the preprotein translocase of the outer mitochondrial membrane from Arabidopsis. Identification of multiple forms of TOM20.
JA  - Plant Physiol
PY  - 2001///
VL  - 125
IS  - 2
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11161051
SP  - 943
EP  - 954
ER  - 

TY  - JOUR
AU  - J B Peltier, J Ytterberg, D A Liberles, P Roepstorff, K J van Wijk
TI  - Identification of a 350-kDa ClpP protease complex with 10 different Clp isoforms in chloroplasts of Arabidopsis thaliana
JA  - J Biol Chem
PY  - 2001///
VL  - 276
IS  - 19
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11278690
SP  - 16318
EP  - 16327
ER  - 

TY  - JOUR
AU  - V Kruft, H Eubel, L Jänsch, W Werhahn, H P Braun
TI  - Proteomic approach to identify novel mitochondrial proteins in Arabidopsis.
JA  - Plant Physiol
PY  - 2001///
VL  - 127
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11743114
SP  - 1694
EP  - 1710
ER  - 

TY  - JOUR
AU  - A H Millar, L J Sweetlove, P Giegé, C J Leaver
TI  - Analysis of the Arabidopsis mitochondrial proteome.
JA  - Plant Physiol
PY  - 2001///
VL  - 127
IS  - 4
UR  - http://www.ncbi.nlm.nih.gov/pubmed/11743115
SP  - 1711
EP  - 1727
ER  -