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AT4G37770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.696
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : 1-amino-cyclopropane-1-carboxylate synthase 8
Curator
Summary (TAIR10)
Encodes an auxin inducible ACC synthase.
Computational
Description (TAIR10)
1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0436eggNOG:KOG0256EMBL:AK221491EnsemblPlants:AT4G37770
EnsemblPlants:AT4G37770.1entrez:829933ExpressionAtlas:Q56Y32Gene3D:3.40.640.10
Gene3D:3.90.1150.10GeneID:829933GO:GO:0003824GO:GO:0009058
GO:GO:0030170Gramene:AT4G37770.1gramene_pathway:4.4.1.14gramene_pathway:ETHYL-PWY
gramene_pathway:PWY-4361-ARAhmmpanther:PTHR11751hmmpanther:PTHR11751:SF431InterPro:IPR004838
InterPro:IPR004839InterPro:IPR015421InterPro:IPR015422InterPro:IPR015424
KEGG:ath:AT4G37770KO:K01762OMA:HDREPEEPaxDb:Q56Y32
Pfam:PF00155Pfam:Q9T065PhylomeDB:Q56Y32PROSITE:PS00105
ProteinModelPortal:Q56Y32RefSeq:NP_195491.1scanprosite:PS00105SMR:Q56Y32
STRING:3702.AT4G37770.1SUPFAM:SSF53383TAIR:AT4G37770tair10-symbols:ACS8
UniGene:At.2875UniProt:Q56Y32UniProt:Q9T065
Coordinates (TAIR10) chr4:+:17752222..17753925
Molecular Weight (calculated) 53373.70 Da
IEP (calculated) 8.01
GRAVY (calculated) -0.39
Length 469 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)